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运用具有空间显式特征的个体基础模型重建瑞士 2003/2004 年 H3N2 流感疫情。

Reconstructing the 2003/2004 H3N2 influenza epidemic in Switzerland with a spatially explicit, individual-based model.

机构信息

Institute for Environmental Decisions, Natural and Social Science Interface, ETH Zurich, Universitaetsstrasse 22, 8092 Zurich, Switzerland.

出版信息

BMC Infect Dis. 2011 May 9;11:115. doi: 10.1186/1471-2334-11-115.

DOI:10.1186/1471-2334-11-115
PMID:21554680
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3112096/
Abstract

UNLABELLED

world has not faced a severe pandemic for decades, except the rather mild H1N1 one in 2009, pandemic influenza models are inherently hypothetical and validation is, thus, difficult. We aim at reconstructing a recent seasonal influenza epidemic that occurred in Switzerland and deem this to be a promising validation strategy for models of influenza spread.

METHODS

We present a spatially explicit, individual-based simulation model of influenza spread. The simulation model bases upon (i) simulated human travel data, (ii) data on human contact patterns and (iii) empirical knowledge on the epidemiology of influenza. For model validation we compare the simulation outcomes with empirical knowledge regarding (i) the shape of the epidemic curve, overall infection rate and reproduction number, (ii) age-dependent infection rates and time of infection, (iii) spatial patterns.

RESULTS

The simulation model is capable of reproducing the shape of the 2003/2004 H3N2 epidemic curve of Switzerland and generates an overall infection rate (14.9 percent) and reproduction numbers (between 1.2 and 1.3), which are realistic for seasonal influenza epidemics. Age and spatial patterns observed in empirical data are also reflected by the model: Highest infection rates are in children between 5 and 14 and the disease spreads along the main transport axes from west to east.

CONCLUSIONS

We show that finding evidence for the validity of simulation models of influenza spread by challenging them with seasonal influenza outbreak data is possible and promising. Simulation models for pandemic spread gain more credibility if they are able to reproduce seasonal influenza outbreaks. For more robust modelling of seasonal influenza, serological data complementing sentinel information would be beneficial.

摘要

未标注

几十年来,世界尚未面临严重的大流行疫情,除了 2009 年较为温和的 H1N1 疫情外,大流行性流感模型本质上是假设性的,因此很难验证。我们旨在重建最近在瑞士发生的季节性流感疫情,我们认为这是验证流感传播模型的一种有前途的策略。

方法

我们提出了一种具有空间显式性的流感传播个体基础模拟模型。该模拟模型基于(i)模拟的人类旅行数据、(ii)人类接触模式数据和(iii)关于流感流行病学的经验知识。为了进行模型验证,我们将模拟结果与以下方面的经验知识进行比较:(i)疫情曲线的形状、总感染率和繁殖数;(ii)年龄相关的感染率和感染时间;(iii)空间模式。

结果

该模拟模型能够再现瑞士 2003/2004 年 H3N2 疫情的疫情曲线形状,并产生了总体感染率(14.9%)和繁殖数(1.2 到 1.3 之间),这对于季节性流感疫情来说是现实的。模型也反映了经验数据中观察到的年龄和空间模式:感染率最高的是 5 至 14 岁的儿童,疾病沿着主要交通轴从西向东传播。

结论

我们表明,通过用季节性流感暴发数据来挑战流感传播模拟模型,找到验证模拟模型有效性的证据是可能的,也是有前途的。如果能够再现季节性流感暴发,那么用于大流行传播的模拟模型就会获得更高的可信度。为了更稳健地模拟季节性流感,补充哨点信息的血清学数据将是有益的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b6a/3112096/7933f8634b7d/1471-2334-11-115-6.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b6a/3112096/7933f8634b7d/1471-2334-11-115-6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b6a/3112096/a4c804ed9b7d/1471-2334-11-115-1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5b6a/3112096/7756e51ca378/1471-2334-11-115-2.jpg
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