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通过将基于活动的建模、基于代理的模拟和移动电话数据相结合,预测城市环境中与 COVID-19 相关干预措施的效果。

Predicting the effects of COVID-19 related interventions in urban settings by combining activity-based modelling, agent-based simulation, and mobile phone data.

机构信息

Transport Systems Planning and Transport Telematics, TU Berlin, Berlin, Germany.

Senozon AG, Zürich, Switzerland.

出版信息

PLoS One. 2021 Oct 28;16(10):e0259037. doi: 10.1371/journal.pone.0259037. eCollection 2021.

Abstract

Epidemiological simulations as a method are used to better understand and predict the spreading of infectious diseases, for example of COVID-19. This paper presents an approach that combines a well-established approach from transportation modelling that uses person-centric data-driven human mobility modelling with a mechanistic infection model and a person-centric disease progression model. The model includes the consequences of different room sizes, air exchange rates, disease import, changed activity participation rates over time (coming from mobility data), masks, indoors vs. outdoors leisure activities, and of contact tracing. It is validated against the infection dynamics in Berlin (Germany). The model can be used to understand the contributions of different activity types to the infection dynamics over time. It predicts the effects of contact reductions, school closures/vacations, masks, or the effect of moving leisure activities from outdoors to indoors in fall, and is thus able to quantitatively predict the consequences of interventions. It is shown that these effects are best given as additive changes of the reproduction number R. The model also explains why contact reductions have decreasing marginal returns, i.e. the first 50% of contact reductions have considerably more effect than the second 50%. Our work shows that is is possible to build detailed epidemiological simulations from microscopic mobility models relatively quickly. They can be used to investigate mechanical aspects of the dynamics, such as the transmission from political decisions via human behavior to infections, consequences of different lockdown measures, or consequences of wearing masks in certain situations. The results can be used to inform political decisions.

摘要

流行病学模拟作为一种方法,用于更好地理解和预测传染病的传播,例如 COVID-19。本文提出了一种方法,将使用基于人员的、数据驱动的人员流动建模的成熟交通建模方法与机械感染模型和基于人员的疾病进展模型相结合。该模型包括不同房间大小、空气交换率、疾病输入、随时间变化的活动参与率(来自移动数据)、口罩、室内与室外休闲活动以及接触追踪的后果。该模型已针对柏林(德国)的感染动态进行了验证。该模型可用于了解不同活动类型随时间推移对感染动态的贡献。它预测了接触减少、学校关闭/休假、口罩或秋季将休闲活动从室外转移到室内的影响,因此能够定量预测干预措施的后果。结果表明,这些影响最好作为繁殖数 R 的附加变化给出。该模型还解释了为什么接触减少的边际收益递减,即接触减少的前 50%的效果比后 50%的效果要大得多。我们的工作表明,从微观流动模型构建详细的流行病学模拟相对较快。它们可用于研究动力学的机械方面,例如通过人类行为从政治决策到感染的传播、不同封锁措施的后果,或在某些情况下戴口罩的后果。结果可用于为政治决策提供信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9ace/8553173/6474e84c8cd2/pone.0259037.g001.jpg

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