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实用方法包括扭转非谐性在复杂分子的热化学计算: 内部坐标多结构逼近。

Practical methods for including torsional anharmonicity in thermochemical calculations on complex molecules: the internal-coordinate multi-structural approximation.

机构信息

Department of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, MN 55455-0431, USA.

出版信息

Phys Chem Chem Phys. 2011 Jun 21;13(23):10885-907. doi: 10.1039/c0cp02644a. Epub 2011 May 11.

DOI:10.1039/c0cp02644a
PMID:21562655
Abstract

Many methods for correcting harmonic partition functions for the presence of torsional motions employ some form of one-dimensional torsional treatment to replace the harmonic contribution of a specific normal mode. However, torsions are often strongly coupled to other degrees of freedom, especially other torsions and low-frequency bending motions, and this coupling can make assigning torsions to specific normal modes problematic. Here, we present a new class of methods, called multi-structural (MS) methods, that circumvents the need for such assignments by instead adjusting the harmonic results by torsional correction factors that are determined using internal coordinates. We present three versions of the MS method: (i) MS-AS based on including all structures (AS), i.e., all conformers generated by internal rotations; (ii) MS-ASCB based on all structures augmented with explicit conformational barrier (CB) information, i.e., including explicit calculations of all barrier heights for internal-rotation barriers between the conformers; and (iii) MS-RS based on including all conformers generated from a reference structure (RS) by independent torsions. In the MS-AS scheme, one has two options for obtaining the local periodicity parameters, one based on consideration of the nearly separable limit and one based on strongly coupled torsions. The latter involves assigning the local periodicities on the basis of Voronoi volumes. The methods are illustrated with calculations for ethanol, 1-butanol, and 1-pentyl radical as well as two one-dimensional torsional potentials. The MS-AS method is particularly interesting because it does not require any information about conformational barriers or about the paths that connect the various structures.

摘要

许多用于校正存在扭转运动的谐波配分函数的方法都采用某种形式的一维扭转处理来代替特定简正模式的谐波贡献。然而,扭转通常与其他自由度强烈耦合,尤其是其他扭转和低频弯曲运动,这种耦合使得将扭转分配给特定的简正模式成为一个问题。在这里,我们提出了一类新的方法,称为多结构 (MS) 方法,它通过使用内部坐标确定的扭转校正因子来调整谐波结果,从而避免了这种分配的需要。我们提出了 MS 方法的三个版本:(i)基于包括所有结构 (AS) 的 MS-AS,即通过内部旋转生成的所有构象;(ii)基于所有结构的 MS-ASCB,通过增加显式构象势垒 (CB) 信息,即包括所有构象之间的内部旋转势垒的所有势垒高度的显式计算;(iii)基于参考构象 (RS) 生成的所有构象的 MS-RS。在 MS-AS 方案中,有两种获得局部周期性参数的方法,一种基于考虑近可分离极限,另一种基于强烈耦合的扭转。后者涉及根据 Voronoi 体积分配局部周期性。该方法通过计算乙醇、1-丁醇和 1-戊基自由基以及两个一维扭转势来进行说明。MS-AS 方法特别有趣,因为它不需要有关构象势垒或连接各种结构的路径的任何信息。

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