Bao Junwei Lucas, Meana-Pañeda Rubén, Truhlar Donald G
Department of Chemistry , Chemical Theory Center and Supercomputing Institute , University of Minnesota , Minneapolis , Minnesota 55455-043 , USA . Email:
Chem Sci. 2015 Oct 1;6(10):5866-5881. doi: 10.1039/c5sc01848j. Epub 2015 Jun 16.
The goal of the present work is modeling the kinetics of a key reaction involved in the combustion of the biofuel 2-butanol. To accomplish this we extended multi-path variational transition state theory (MP-VTST) with the small curvature tunneling (SCT) approximation to include multistructural anharmonicity factors for molecules with chiral carbons. We use the resulting theory to predict the site-dependent rate constants of the hydrogen abstraction from 2-butanol by hydroperoxyl radical. The generalized transmission coefficients were averaged over the four lowest-energy reaction paths. The computed forward reaction rate constants indicate that hydrogen abstraction from the C-2 site has the largest contribution to the overall reaction from 200 K to 2400 K, with a contribution ranging from 99.9988% at 200 K to 88.9% at 800 K to 21.2% at 3000 K, while hydrogen abstraction from the oxygen site makes the lowest contribution at all temperatures, ranging from 2.5 × 10% at 200 K to 0.65% at 800 K to 18% at 3000 K. This work highlights the importance of including the multiple-structure and torsional potential anharmonicity in the computation of the thermal rate constants. We also analyzed the role played by the hydrogen bond at the transition state, and we illustrated the risks of (a) considering only the lowest-energy conformations in the calculations of the rate constants or (b) ignoring the nonlinear temperature dependence of the activation energies. A hydrogen bond at the transition state can lower the enthalpy of activation, but raise the free energy of activation. We find an energy of activation that increases from 11 kcal mol at 200 K to more than 36 kcal mol at high temperature for this radical reaction with a biofuel molecule.
本工作的目标是对生物燃料2-丁醇燃烧过程中涉及的一个关键反应的动力学进行建模。为实现这一目标,我们将多路径变分过渡态理论(MP-VTST)与小曲率隧道效应(SCT)近似相结合,以纳入具有手性碳的分子的多结构非谐性因子。我们使用所得理论预测氢过氧自由基从2-丁醇夺取氢的位点依赖性速率常数。广义传输系数在四个最低能量反应路径上进行平均。计算得到的正向反应速率常数表明,从200 K到2400 K,从C-2位点夺取氢对总反应的贡献最大,贡献范围从200 K时的99.9988%到800 K时的88.9%,再到3000 K时的21.2%,而从氧位点夺取氢在所有温度下的贡献最小,范围从200 K时的2.5×10%到800 K时的0.65%,再到3000 K时的18%。这项工作突出了在热速率常数计算中纳入多结构和扭转势非谐性的重要性。我们还分析了过渡态氢键所起的作用,并说明了在速率常数计算中(a)仅考虑最低能量构象或(b)忽略活化能的非线性温度依赖性的风险。过渡态的氢键可以降低活化焓,但会提高活化自由能。我们发现,对于这个与生物燃料分子发生的自由基反应,活化能从200 K时的11 kcal/mol增加到高温时的超过36 kcal/mol。