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降解、迁移、重新组合:剪接蛋白信号调控。

Degrade, move, regroup: signaling control of splicing proteins.

机构信息

Department of Biochemistry and Biophysics, University of Pennsylvania School of Medicine, Philadelphia, PA 19104-6059, USA.

出版信息

Trends Biochem Sci. 2011 Aug;36(8):397-404. doi: 10.1016/j.tibs.2011.04.003. Epub 2011 May 17.

DOI:10.1016/j.tibs.2011.04.003
PMID:21596569
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3155649/
Abstract

With recent advances in microarrays and sequencing it is now relatively straightforward to compare pre-mRNA splicing patterns in different cellular conditions on a genome-wide scale. Such studies have revealed extensive changes in cellular splicing programs in response to stimuli such as neuronal depolarization, DNA damage, immune signaling and cellular metabolic changes. However, for many years our understanding of the signaling pathways responsible for such splicing changes was greatly lacking. Excitingly, over the past few years this gap has begun to close. Recent studies now suggest notable trends in the mechanisms that link cellular stimuli to downstream alternative splicing events. These include regulated synthesis or degradation of splicing factors, differential protein-protein interactions, altered nuclear translocation and changes in transcription elongation.

摘要

随着微阵列和测序技术的最新进展,现在相对容易在全基因组范围内比较不同细胞条件下的前体 mRNA 剪接模式。此类研究揭示了细胞剪接程序在响应神经元去极化、DNA 损伤、免疫信号和细胞代谢变化等刺激时发生的广泛变化。然而,多年来,我们对负责这些剪接变化的信号通路的理解非常缺乏。令人兴奋的是,在过去的几年中,这种差距开始缩小。最近的研究表明,将细胞刺激与下游选择性剪接事件联系起来的机制存在显著趋势。这些机制包括剪接因子的合成或降解的调节、差异蛋白-蛋白相互作用、核转位的改变以及转录延伸的变化。

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本文引用的文献

1
Signal- and development-dependent alternative splicing of LEF1 in T cells is controlled by CELF2.CELF2 调控 T 细胞中信号和发育依赖性的 LEF1 可变剪接。
Mol Cell Biol. 2011 Jun;31(11):2184-95. doi: 10.1128/MCB.05170-11. Epub 2011 Mar 28.
2
Acetylation and phosphorylation of SRSF2 control cell fate decision in response to cisplatin.SRSF2的乙酰化和磷酸化可控制细胞对顺铂的命运决定。
EMBO J. 2011 Feb 2;30(3):510-23. doi: 10.1038/emboj.2010.333. Epub 2010 Dec 14.
3
Alternative splicing of caspase 9 is modulated by the phosphoinositide 3-kinase/Akt pathway via phosphorylation of SRp30a.通过磷酸肌醇 3-激酶/Akt 途径对 SRp30a 的磷酸化调节 caspase 9 的可变剪接。
Cancer Res. 2010 Nov 15;70(22):9185-96. doi: 10.1158/0008-5472.CAN-10-1545. Epub 2010 Nov 2.
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Alternative pre-mRNA splicing regulation in cancer: pathways and programs unhinged.癌症中替代前体 mRNA 剪接调控:脱节的通路和程序。
Genes Dev. 2010 Nov 1;24(21):2343-64. doi: 10.1101/gad.1973010.
5
The DNA damage response pathway regulates the alternative splicing of the apoptotic mediator Bcl-x.DNA 损伤反应通路调节凋亡介质 Bcl-x 的可变剪接。
J Biol Chem. 2011 Jan 7;286(1):331-40. doi: 10.1074/jbc.M110.162644. Epub 2010 Oct 27.
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Cotranscriptional exon skipping in the genotoxic stress response.基因毒性应激反应中的共转录外显子跳跃。
Nat Struct Mol Biol. 2010 Nov;17(11):1358-66. doi: 10.1038/nsmb.1912. Epub 2010 Oct 24.
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Phosphorylation-dependent regulation of PSF by GSK3 controls CD45 alternative splicing.GSK3 通过磷酸化依赖性调节 PSF 控制 CD45 可变剪接。
Mol Cell. 2010 Oct 8;40(1):126-37. doi: 10.1016/j.molcel.2010.09.013.
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An ESRP-regulated splicing programme is abrogated during the epithelial-mesenchymal transition.ESRP 调控的剪接程序在上皮-间充质转化过程中被废除。
EMBO J. 2010 Oct 6;29(19):3286-300. doi: 10.1038/emboj.2010.195. Epub 2010 Aug 13.
9
Global regulation of alternative splicing during myogenic differentiation.肌发生分化过程中的可变剪接的全球调控。
Nucleic Acids Res. 2010 Nov;38(21):7651-64. doi: 10.1093/nar/gkq614. Epub 2010 Jul 15.
10
Control of fibroblast fibronectin expression and alternative splicing via the PI3K/Akt/mTOR pathway.通过 PI3K/Akt/mTOR 通路控制成纤维细胞纤连蛋白表达和选择性剪接。
Exp Cell Res. 2010 Oct 1;316(16):2644-53. doi: 10.1016/j.yexcr.2010.06.028. Epub 2010 Jul 13.