Kuang Wen-jian, Huang Ping, Tuo Ya, Sun Rui-fang, Li Sheng-bin
Key Laboratory of Forensic Science, National Ministry of Health, Xi'an Jiaotong University, Xi'an, China.
Fa Yi Xue Za Zhi. 2011 Apr;27(2):112-6.
To explore the features of genetic differentiation and gene flow of ten minorities in Yunnan province according to nine CODIS short tandem repeat(STR) loci (CSF1PO, FGA, THO1, TPOX, v WA, D3S1358, D5S818, D7S820 and D13S317).
Heterozygosity and parameters of population differentiation such as F, theta, f and Gst at each locus were calculated. DA genetic distance and fixation index Fst were calculated by Phylip 3.6 and Arlequin 3.0 software, respectively. Phylogenetic trees were constructed by Mega 3.0, and the patterns of gene flow were analyzed by R-matrix model.
It showed that average genetic heterogeneity in ten minorities was above 0.7. Significant difference was found for most of the loci in genetic differentiation. Phylogenetic tree analysis showed that the ten minorities were divided into two clusters. The results of the R-matrix analysis showed that the gene flow of Yi and Dai minorities were higher than that of other minorities, while the pattern of gene flow of Dulong minority demonstrated some of the isolation.
Nine STR loci commonly used in forensic identification show a high polymorphism. Heterozygosity can be used for investigating genetic differentiation and gene flow of minority. The ten minorities in Yunnan are independent populations, while the level of differentiation is not high. The relationship in evolution is not far from each other and shows a widely gene flow among the minorities.
根据9个CODIS短串联重复序列(STR)基因座(CSF1PO、FGA、THO1、TPOX、vWA、D3S1358、D5S818、D7S820和D13S317)探索云南省10个少数民族的遗传分化特征和基因流情况。
计算每个基因座的杂合度以及群体分化参数如F、theta、f和Gst。分别通过Phylip 3.6和Arlequin 3.0软件计算DA遗传距离和固定指数Fst。用Mega 3.0构建系统发育树,并通过R矩阵模型分析基因流模式。
结果显示10个少数民族的平均遗传异质性高于0.7。多数基因座在遗传分化上存在显著差异。系统发育树分析表明10个少数民族分为两个聚类。R矩阵分析结果显示彝族和傣族的基因流高于其他少数民族,而独龙族的基因流模式呈现出一定的隔离性。
法医鉴定中常用的9个STR基因座显示出高度多态性。杂合度可用于研究少数民族的遗传分化和基因流。云南的10个少数民族是独立群体,但其分化水平不高。在进化上关系不远,且少数民族之间呈现出广泛的基因流。