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在巴西南部的淡水和平体涡虫(扁形动物门,三肠目)中出现并丰富的水手样元件。

Occurrence and abundance of a mariner-like element in freshwater and terrestrial planarians (Platyhelminthes, Tricladida) from southern Brazil.

机构信息

Laboratório de Biologia Molecular, Universidade do Vale do Rio dos Sinos, São Leopoldo, RS Brazil.

出版信息

Genet Mol Biol. 2009 Oct;32(4):731-9. doi: 10.1590/S1415-47572009005000072. Epub 2009 Dec 1.

Abstract

Transposable elements are DNA sequences present in all the large phylogenetic groups, both capable of changing position within the genome and constituting a significant part of eukaryotic genomes. The mariner family of transposons is one of the few which occurs in a wide variety of taxonomic groups, including freshwater planarians. Nevertheless, so far only five planarian species have been reported to carry mariner-like elements (MLEs), although several different species have been investigated. Regarding the number of copies of MLEs, Girardia tigrina is the only planarian species in which this has been evaluated, with an estimation of 8,000 copies of the element per haploid genome. Preliminary results obtained in our laboratory demonstrated that MLE is found in a large number of different species of planarians, including terrestrial. With this in mind, the aim was to evaluate the occurrence and estimate the number of MLE copies in different planarian species collected in south Brazil. Twenty-eight individuals from 15 planarian species were analyzed. By using PCR and the hybridization of nucleic acids, it was found that MLE was present in all the analyzed species, the number of copies being high, probably over 10(3) per haploid genome.

摘要

转座元件是存在于所有大的进化群中的 DNA 序列,既能在基因组内改变位置,又构成真核基因组的重要部分。转座子的 mariner 家族是少数出现在广泛的分类群中的家族之一,包括淡水扁形动物。然而,到目前为止,只有五种扁形动物被报道携带类 mariner 元件(MLEs),尽管已经研究了几种不同的物种。关于 MLEs 的拷贝数,只有 G. tigrina 这一种扁形动物进行了评估,估计每个单倍体基因组中有 8000 个元件拷贝。我们实验室的初步结果表明,MLE 存在于大量不同的扁形动物物种中,包括陆生的。有鉴于此,本研究旨在评估不同采集于巴西南部的扁形动物物种中 MLE 的存在情况,并估计 MLE 拷贝数。分析了来自 15 种扁形动物的 28 个个体。通过 PCR 和核酸杂交,发现 MLE 存在于所有分析的物种中,拷贝数很高,每个单倍体基因组可能超过 10^3 个。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3b36/3036899/65b115cf589f/gmb-32-4-731-gfig1.jpg

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