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通过随机分叉分析细胞网络的动态行为。

Analysing dynamical behavior of cellular networks via stochastic bifurcations.

机构信息

Center for Dynamics of Complex Systems, University of Potsdam, Potsdam, Germany.

出版信息

PLoS One. 2011;6(5):e19696. doi: 10.1371/journal.pone.0019696. Epub 2011 May 25.

Abstract

The dynamical structure of genetic networks determines the occurrence of various biological mechanisms, such as cellular differentiation. However, the question of how cellular diversity evolves in relation to the inherent stochasticity and intercellular communication remains still to be understood. Here, we define a concept of stochastic bifurcations suitable to investigate the dynamical structure of genetic networks, and show that under stochastic influence, the expression of given proteins of interest is defined via the probability distribution of the phase variable, representing one of the genes constituting the system. Moreover, we show that under changing stochastic conditions, the probabilities of expressing certain concentration values are different, leading to different functionality of the cells, and thus to differentiation of the cells in the various types.

摘要

遗传网络的动态结构决定了各种生物学机制的发生,如细胞分化。然而,细胞多样性如何与内在的随机性和细胞间通讯相关而进化的问题仍然有待理解。在这里,我们定义了一个适合研究遗传网络动态结构的随机分叉概念,并表明在随机影响下,感兴趣的给定蛋白质的表达是通过代表系统组成基因之一的相位变量的概率分布来定义的。此外,我们表明,在随机条件变化的情况下,表达某些浓度值的概率不同,导致细胞的功能不同,从而导致细胞在不同类型中分化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7318/3102061/dc49f777e2fb/pone.0019696.g001.jpg

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