Institute of Biophysical Chemistry, Center for Biomolecular Magnetic Resonance, Goethe-University, Frankfurt am Main, Germany.
J Biomol NMR. 2011 Jun;50(2):167-90. doi: 10.1007/s10858-011-9507-3. Epub 2011 Jun 7.
An extension to HN(CO-α/β-N,C(α)-J)-TROSY (Permi and Annila in J Biomol NMR 16:221-227, 2000) is proposed that permits the simultaneous determination of the four coupling constants (1) J (N'(i)Cα(i)), (2) J (HN(i)Cα(i)), (2) J (Cα(i-1)N'(i)), and (3) J (Cα(i-1)HN(i)) in (15)N,(13)C-labeled proteins. Contrasting the original scheme, in which two separate subspectra exhibit the (2) J (CαN') coupling as inphase and antiphase splitting (IPAP), we here record four subspectra that exhibit all combinations of inphase and antiphase splittings possible with respect to both (2) J (CαN') and (1) J (N'Cα) (DIPAP). Complementary sign patterns in the different spectrum constituents overdetermine the coupling constants which can thus be extracted at higher accuracy than is possible with the original experiment. Fully exploiting data redundance, simultaneous 2D lineshape fitting of the E.COSY multiplet tilts in all four subspectra provides all coupling constants at ultimate precision. Cross-correlation and differential-relaxation effects were taken into account in the evaluation procedure. By applying a four-point Fourier transform, the set of spectra is reversibly interconverted between DIPAP and spin-state representations. Methods are exemplified using proteins of various size.
提出了对 HN(CO-α/β-N,C(α)-J)-TROSY 的扩展(Permi 和 Annila 在 J Biomol NMR 16:221-227, 2000),该扩展允许同时确定四个耦合常数(1)J(N'Cα(i))、(2)J(HN(i)Cα(i))、(2)J(Cα(i-1)N'(i))和(3)J(Cα(i-1)HN(i))在(15)N,(13)C 标记的蛋白质中。与原始方案不同,在原始方案中,两个单独的子谱表现出(2)J(CαN')耦合的同相和反相分裂(IPAP),而我们在此记录了四个子谱,它们表现出与(2)J(CαN')和(1)J(N'Cα)(DIPAP)都可能的所有同相和反相分裂的组合。不同谱分量中的互补符号模式可以确定耦合常数,从而比原始实验更准确地提取耦合常数。充分利用数据冗余,在所有四个子谱中对 E.COSY 多重峰倾斜进行 2D 线谱拟合,可提供最终精度下的所有耦合常数。在评估过程中考虑了交叉相关和差分式弛豫效应。通过应用四点傅里叶变换,可以在 DIPAP 和自旋态表示之间可逆地转换谱集。该方法使用各种大小的蛋白质进行了示例说明。