氢键对酰胺 1H 化学位移各向异性的影响通过交叉相关弛豫和液晶 NMR 光谱研究。
The impact of hydrogen bonding on amide 1H chemical shift anisotropy studied by cross-correlated relaxation and liquid crystal NMR spectroscopy.
机构信息
Qingdao Institute of Bioenergy and Bioprocess Technology, Chinese Academy of Sciences, Qingdao 266061, China.
出版信息
J Am Chem Soc. 2010 Aug 11;132(31):10866-75. doi: 10.1021/ja103629e.
Site-specific (1)H chemical shift anisotropy (CSA) tensors have been derived for the well-ordered backbone amide moieties in the B3 domain of protein G (GB3). Experimental input data include residual chemical shift anisotropy (RCSA), measured in six mutants that align differently relative to the static magnetic field when dissolved in a liquid crystalline Pf1 suspension, and cross-correlated relaxation rates between the (1)H(N) CSA tensor and either the (1)H-(15)N, the (1)H-(13)C', or the (1)H-(13)C(alpha) dipolar interactions. Analyses with the assumption that the (1)H(N) CSA tensor is symmetric with respect to the peptide plane (three-parameter fit) or without this premise (five-parameter fit) yield very similar results, confirming the robustness of the experimental input data, and that, to a good approximation, one of the principal components orients orthogonal to the peptide plane. (1)H(N) CSA tensors are found to deviate strongly from axial symmetry, with the most shielded tensor component roughly parallel to the N-H vector, and the least shielded component orthogonal to the peptide plane. DFT calculations on pairs of N-methyl acetamide and acetamide in H-bonded geometries taken from the GB3 X-ray structure correlate with experimental data and indicate that H-bonding effects dominate variations in the (1)H(N) CSA. Using experimentally derived (1)H(N) CSA tensors, the optimal relaxation interference effect needed for narrowest (1)H(N) TROSY line widths is found at approximately 1200 MHz.
已为 Pf1 液晶中不同排列方向的 GB3 B3 结构域的酰胺基侧链推导了各向异性化学位移(CSA)张量。实验输入数据包括在六个不同排列方向的突变体中测量的残差各向异性化学位移(RCSA),以及在 Pf1 液晶中溶解时,(1)H(N) CSA 张量与 (1)H-(15)N、(1)H-(13)C'或 (1)H-(13)C(alpha)偶极相互作用之间的交叉弛豫率。分析假设 (1)H(N) CSA 张量相对于肽平面是对称的(三参数拟合)或没有这个前提(五参数拟合),得到的结果非常相似,这证实了实验输入数据的稳健性,并且,在很好的近似下,其中一个主分量大致垂直于肽平面。发现 (1)H(N) CSA 张量强烈偏离各向同性,屏蔽最强的张量分量大致平行于 N-H 矢量,屏蔽最弱的分量垂直于肽平面。从 GB3 X 射线结构中氢键构型的 N-甲基乙酰胺和乙酰胺对的密度泛函理论(DFT)计算与实验数据相关联,并表明氢键效应主导了 (1)H(N) CSA 的变化。使用实验推导的 (1)H(N) CSA 张量,找到了最窄 (1)H(N) TROSY 线宽所需的最佳弛豫干扰效应,约为 1200 MHz。
相似文献
Solid State Nucl Magn Reson. 2000-6
引用本文的文献
Solid State Nucl Magn Reson. 2018-3-15
J Phys Chem Lett. 2017-9-7
Proc Natl Acad Sci U S A. 2016-5-17
Solid State Nucl Magn Reson. 2016
本文引用的文献
Proc Natl Acad Sci U S A. 2009-9-8
J Am Chem Soc. 2009-10-7
J Am Chem Soc. 2008-12-10
J Biomol NMR. 2008-6
J Phys Chem B. 2008-5-15
J Am Chem Soc. 2007-9-19