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多蛋白在表面吸附过程中的相互作用:溶菌酶在带电固体表面聚集的分子动力学研究。

Multiprotein interactions during surface adsorption: a molecular dynamics study of lysozyme aggregation at a charged solid surface.

机构信息

Department of Chemical and Process Engineering, University of Strathclyde, James Weir Building, 75 Montrose Street, Glasgow G1 1XJ, United Kingdom.

出版信息

J Phys Chem B. 2011 Jul 21;115(28):8891-900. doi: 10.1021/jp1121239. Epub 2011 Jun 24.

Abstract

Multiprotein adsorption of hen egg white lysozyme at a model charged ionic surface is studied using fully atomistic molecular dynamics simulations. Simulations with two, three, and five proteins, in various orientations with respect the surface, are performed over a 100 ns time scale. Mutated proteins with point mutations at the major (Arg128 and Arg125) and minor (Arg68) surface adsorption sites are also studied. The 100 ns time scale used is sufficient to observe protein translations, rotations, adsorption, and aggregation. Two competing processes of particular interest are observed, namely surface adsorption and protein-protein aggregation. At low protein concentration, the proteins first adsorb in isolation and can then reorientate on the surface to aggregate. At high concentration, the proteins aggregate in the solution and then adsorb in nonspecific ways. This work demonstrates the role of protein concentration in adsorption, indicates the residues involved in both types of interaction (protein-protein and protein-surface), and gives an insight into processes to be considered in the development of new functionalized material systems.

摘要

使用全原子分子动力学模拟研究了鸡卵清白溶菌酶在模型荷电离子表面上的多蛋白吸附。在 100ns 的时间尺度内,针对两个、三个和五个蛋白质,以相对于表面的各种取向进行了模拟。还研究了在主要(Arg128 和 Arg125)和次要(Arg68)表面吸附位点具有点突变的突变蛋白。使用的 100ns 时间尺度足以观察到蛋白质的平移、旋转、吸附和聚集。观察到两个特别感兴趣的竞争过程,即表面吸附和蛋白质-蛋白质聚集。在低蛋白浓度下,蛋白质首先在隔离状态下吸附,然后可以在表面上重新定向聚集。在高浓度下,蛋白质在溶液中聚集,然后以非特异性方式吸附。这项工作表明了蛋白质浓度在吸附中的作用,指出了涉及两种相互作用(蛋白质-蛋白质和蛋白质-表面)的残基,并深入了解了在开发新的功能化材料系统时需要考虑的过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a8bf/3662390/e573abe01bce/jp-2010-121239_0005.jpg

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