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采用从头算/密度泛函理论和蒙特卡罗计算相结合的方法,计算溶液中的相对标准化学势。

Combined ab initio/DFT and Monte Carlo calculation of relative standard chemical potentials in solution.

机构信息

Center for Drug Design and Development, The University of Toledo, Toledo, Ohio 43606-3390, USA.

出版信息

J Phys Chem B. 2011 Aug 11;115(31):9634-45. doi: 10.1021/jp204018s. Epub 2011 Jul 8.

DOI:10.1021/jp204018s
PMID:21682330
Abstract

A method has been proposed for pure theoretical estimation of relative standard chemical potentials (1 mol/dm(3) standard state) and related K(c) equilibrium constants for tautomers/conformers dissolved in some solvents. The relative internal free energy could be obtained by means of in-solution ab initio/DFT methods. Using the free energy perturbation method for the transformation of the involved species, the solvation contribution to the relative standard chemical potential can be determined by considering 1 M solution models. Comparison of the ΔG(solv)/MC value calculated for the 1 M solution with those obtained for the system at other concentrations helps explore the ratio of the activity coefficients in nonstandard states. The method has been applied for the study of the tautomeric pair of formaldoxime and nitrosomethane with large structural differences. It was pointed out that the ΔG(solv)/MC values for the 1 and 0.11 M solutions differ by up to 0.2 kcal/mol, when atomic charges are derived on the basis of the in-solution IEF-PCM/B3LYP/aug-cc-pvtz molecular electrostatic potential. On the basis of calculated free energy differences, the ratio of the CH(3)NO and CH(2)NOH activity coefficients in 0.11 molar aqueous and dichloromethane solutions were predicted as of 1.4 and 0.8, respectively. The 0.11 M model is hypothetical by assuming that only one of the tautomers exists in the solution box. As an extension of the method, a procedure has been outlined where contributions to the change of the solvation free energy by terms related to relative activity coefficients might be assessed at physically relevant concentrations for the equilibrated tautomers.

摘要

已经提出了一种方法,用于纯理论估计相对标准化学势(1 mol/dm(3)标准状态)和溶解在某些溶剂中的互变异构体/构象的相关 K(c)平衡常数。相对内部自由能可以通过溶液中的从头算/DFT 方法获得。使用自由能微扰法对涉及的物种进行变换,可以通过考虑 1 M 溶液模型来确定溶剂化对相对标准化学势的贡献。对于 1 M 溶液计算的ΔG(solv)/MC 值与在其他浓度下获得的系统值进行比较有助于探索非标准状态下的活度系数比。该方法已应用于具有较大结构差异的甲醛肟和亚硝基甲烷互变异构体的研究。当原子电荷是根据溶液中 IEF-PCM/B3LYP/aug-cc-pvtz 分子静电势得出时,指出 1 和 0.11 M 溶液的ΔG(solv)/MC 值相差可达 0.2 kcal/mol。基于计算出的自由能差异,预测 0.11 摩尔水溶液和二氯甲烷溶液中 CH(3)NO 和 CH(2)NOH 的活度系数比分别为 1.4 和 0.8。0.11 M 模型是假设在溶液盒中只存在一种互变异构体的假设模型。作为该方法的扩展,已经概述了一种程序,其中可以在与相对活度系数相关的项对溶剂化自由能变化的贡献可以在与平衡互变异构体相关的物理相关浓度下进行评估。

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