• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

对甘氨酸和甲基氨基甲酸异构体低能构象的理论研究及其在星际介质中的作用。

A theoretical investigation of the low energy conformers of the isomers glycine and methylcarbamic acid and their role in the interstellar medium.

机构信息

Department of Chemistry, University of Hawaii at Manoa, Honolulu, HI 98622, USA.

出版信息

Phys Chem Chem Phys. 2011 Sep 21;13(35):15774-84. doi: 10.1039/c1cp20656g. Epub 2011 Jun 17.

DOI:10.1039/c1cp20656g
PMID:21687849
Abstract

We have theoretically investigated the low energy conformers of neutral glycine (NH(2)CH(2)COOH) and its isomer methylcarbamic acid (CH(3)NHCOOH) in the gas phase. A total of 16 different levels of the theory, including CCSD(T), MP2 and B3LYP methods with various Pople and Dunning type basis sets with and without polarization and diffuse functions were used. We found eight low energy glycine conformers, where the heavy atoms in three have a planar backbone, and four low energy methylcarbamic acid conformers all with non-planar backbones. Interestingly at all levels of theory, we found that the most stable methylcarbamic acid conformer is significantly lower in energy than the lowest energy glycine conformer. The MP2 level and single point CCSD(T) calculations show the lowest energy methylcarbamic acid conformer to be between 31 to 37 kJ mol(-1) lower in energy than the lowest energy glycine conformer. These calculations suggest that methylcarbamic acid might serve as a precursor to glycine formation in the Interstellar Medium (ISM). We also report the theoretical harmonic vibrational frequencies, infrared intensities, moment of inertia, rotational constants and dipole moments for all of the conformers. In order to understand how glycine or methylcarbamic acid might be formed in the ISM, larger calculations which model glycine or its isomer interacting with several surrounding molecules, such as water, are needed. We demonstrate that B3LYP method should provide a reliable and computationally practical approach to modeling these larger systems.

摘要

我们从理论上研究了中性甘氨酸(NH(2)CH(2)COOH)及其异构体甲基氨基甲酸(CH(3)NHCOOH)在气相中的低能构象。总共使用了 16 种不同理论水平的方法,包括 CCSD(T)、MP2 和 B3LYP 方法,以及带有和不带有极化和弥散函数的各种 Pople 和 Dunning 类型基组。我们发现了 8 种低能甘氨酸构象,其中 3 种重原子具有平面骨架,4 种低能甲基氨基甲酸构象都具有非平面骨架。有趣的是,在所有理论水平上,我们发现最稳定的甲基氨基甲酸构象的能量明显低于最低能量甘氨酸构象。MP2 水平和单点 CCSD(T)计算表明,最低能量的甲基氨基甲酸构象的能量比最低能量的甘氨酸构象低 31 到 37 kJ mol(-1)。这些计算表明,甲基氨基甲酸可能是星际介质(ISM)中甘氨酸形成的前体。我们还报告了所有构象的理论谐振动频率、红外强度、转动惯量、转动常数和偶极矩。为了了解甘氨酸或甲基氨基甲酸如何在 ISM 中形成,需要进行更大规模的计算,模拟甘氨酸或其异构体与几个周围分子(如水)相互作用。我们证明 B3LYP 方法应该为模拟这些更大的系统提供一种可靠且计算实用的方法。

相似文献

1
A theoretical investigation of the low energy conformers of the isomers glycine and methylcarbamic acid and their role in the interstellar medium.对甘氨酸和甲基氨基甲酸异构体低能构象的理论研究及其在星际介质中的作用。
Phys Chem Chem Phys. 2011 Sep 21;13(35):15774-84. doi: 10.1039/c1cp20656g. Epub 2011 Jun 17.
2
A theoretical investigation of the relative stability of hydrated glycine and methylcarbamic acid--from water clusters to interstellar ices.水合甘氨酸和甲基氨基甲酸相对稳定性的理论研究——从水分子簇到星际冰。
Phys Chem Chem Phys. 2012 Apr 14;14(14):4942-58. doi: 10.1039/c2cp23798a. Epub 2012 Mar 1.
3
Conformational stability from variable temperature infrared spectra of krypton solutions, ab initio calculations, vibrational assignment, and r0 structural parameters of 1,3-difluoropropane.氪溶液变温红外光谱的构象稳定性、从头算计算、振动归属及1,3 - 二氟丙烷的r0结构参数
Spectrochim Acta A Mol Biomol Spectrosc. 2004 Jun;60(7):1659-76. doi: 10.1016/j.saa.2003.08.024.
4
A microwave and quantum chemical study of the conformational properties and intramolecular hydrogen bonding of 1-fluorocyclopropanecarboxylic acid.1-氟环丙烷羧酸构象性质及分子内氢键的微波与量子化学研究
J Phys Chem A. 2005 Jul 21;109(28):6344-50. doi: 10.1021/jp050924e.
5
Conformers of gaseous proline.气态脯氨酸的构象异构体
Chemistry. 2003 Feb 17;9(4):1008-19. doi: 10.1002/chem.200390103.
6
Internal rotation in peroxynitrous acid (ONOOH).过氧亚硝酸(ONOOH)中的内旋转。
J Chem Phys. 2005 Apr 1;122(13):134312. doi: 10.1063/1.1867435.
7
A computational study on the structures of methylamine-carbon dioxide-water clusters: evidence for the barrier free formation of the methylcarbamic acid zwitterion (CH3NH2+COO-) in interstellar water ices.甲胺-二氧化碳-水团簇结构的计算研究:星际水冰中无势垒形成甲氨基甲酸两性离子(CH3NH2+COO-)的证据。
Phys Chem Chem Phys. 2011 Jun 21;13(23):11083-98. doi: 10.1039/c0cp01962c. Epub 2011 Feb 10.
8
Ab initio studies of aspartic acid conformers in gas phase and in solution.天冬氨酸构象异构体在气相和溶液中的从头算研究。
J Chem Phys. 2007 Oct 21;127(15):154314. doi: 10.1063/1.2777161.
9
Many-body interaction in glycine-(water)3 complex using density functional theory method.使用密度泛函理论方法研究甘氨酸-(水)3 络合物中的多体相互作用。
J Chem Phys. 2004 Jan 1;120(1):170-4. doi: 10.1063/1.1630019.
10
Vibrational spectrum of glycine molecule.甘氨酸分子的振动光谱。
Spectrochim Acta A Mol Biomol Spectrosc. 2005 Sep;61(11-12):2741-6. doi: 10.1016/j.saa.2004.09.029. Epub 2004 Dec 9.