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挖掘药物-疾病关系进行计算药物重定位。

Exploiting drug-disease relationships for computational drug repositioning.

机构信息

Stanford University, Stanford, CA, USA.

出版信息

Brief Bioinform. 2011 Jul;12(4):303-11. doi: 10.1093/bib/bbr013. Epub 2011 Jun 20.

Abstract

Finding new uses for existing drugs, or drug repositioning, has been used as a strategy for decades to get drugs to more patients. As the ability to measure molecules in high-throughput ways has improved over the past decade, it is logical that such data might be useful for enabling drug repositioning through computational methods. Many computational predictions for new indications have been borne out in cellular model systems, though extensive animal model and clinical trial-based validation are still pending. In this review, we show that computational methods for drug repositioning can be classified in two axes: drug based, where discovery initiates from the chemical perspective, or disease based, where discovery initiates from the clinical perspective of disease or its pathology. Newer algorithms for computational drug repositioning will likely span these two axes, will take advantage of newer types of molecular measurements, and will certainly play a role in reducing the global burden of disease.

摘要

寻找现有药物的新用途(即药物重定位),几十年来一直被用作将药物推向更多患者的策略。过去十年,高通量测量分子的能力不断提高,因此通过计算方法实现药物重定位,这些数据可能会很有用。虽然仍有待基于广泛的动物模型和临床试验进行验证,但许多针对新适应症的计算预测已经在细胞模型系统中得到证实。在这篇综述中,我们表明,药物重定位的计算方法可以分为两个轴:基于药物的方法,其发现始于化学角度,或基于疾病的方法,其发现始于疾病或其病理学的临床角度。用于计算药物重定位的较新算法可能会跨越这两个轴,将利用新型分子测量类型,并且肯定会在降低全球疾病负担方面发挥作用。

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本文引用的文献

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PROMISCUOUS: a database for network-based drug-repositioning.PROMISCUOUS:一个基于网络的药物重新定位数据库。
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Discovery of drug mode of action and drug repositioning from transcriptional responses.从转录反应中发现药物作用模式和药物重定位。
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Nature. 2009 Nov 12;462(7270):175-81. doi: 10.1038/nature08506. Epub 2009 Nov 1.
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J Chem Inf Model. 2009 Sep;49(9):2044-55. doi: 10.1021/ci9001876.

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