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[抗生链霉菌扩增序列结构的研究]

[Study of the structure of amplifying sequence of Streptomyces antibioticus].

作者信息

Ukhabotina L S, Danilenko V N

出版信息

Antibiot Khimioter. 1990 Jun;35(6):7-12.

PMID:2169231
Abstract

A low productive laboratory strain of S. antibioticus and a strain with an increased productivity of oleandomycin derived from it were studied comparatively with using restriction analysis and blotting hybridization. Amplification, site specific integration and segregation of the DNA sequence 32.0 kb in size were detected in the strains. The chromosomes of the laboratory strain contained one copy of the amplifying sequence AUD. After uniting of the end sequences AUD appeared to be capable of segregating from the chromosomes and its one copy per five genomes was present in the form of an extrachromosomal genetic element eSA1. The genome of the strain with increased productivity of oleandomycin contained in its chromosomes sequence ADS-Sa1 amplified to 150 copies and the eSA1 extrachromosomal genetic element in the form of mono-, di- and trimeric structures in the quantity of approximately one copy per genome. The BamHIB fragment of the eSA1 DNA 4 kb in size was identified. The fragment was able to participate in segregation or integration of eSA1 from or into the chromosomes since its subfragments were flanking AUD and ADS-SA1 in the chromosomes. The BamHIB fragment was hybridizing with a number of fragments of the chromosomal DNA of S. antibioticus, S. erythraeus. S. lividans and other strains of streptomycetes. It probably contained an IS-like element or a dispersed genetic element of another class. The DNA sequence of the eSA1 genetic element contained regions homologous to the sequence of the Erm E gene in S. erythraeus NRRL 2338.

摘要

利用限制性分析和印迹杂交技术,对一株低产的抗生链霉菌实验室菌株及其衍生的提高竹桃霉素产量的菌株进行了比较研究。在这些菌株中检测到了大小为32.0 kb的DNA序列的扩增、位点特异性整合和分离。实验室菌株的染色体含有一份扩增序列AUD的拷贝。AUD末端序列连接后,似乎能够从染色体上分离出来,其每五个基因组中有一份以染色体外遗传元件eSA1的形式存在。竹桃霉素产量提高的菌株的基因组在其染色体中含有扩增到150份的序列ADS-Sa1,以及以单体、二聚体和三聚体结构形式存在的eSA1染色体外遗传元件,每个基因组中约有一份。鉴定出了大小为4 kb的eSA1 DNA的BamHIB片段。该片段能够参与eSA1从染色体上的分离或整合到染色体中,因为其亚片段在染色体中位于AUD和ADS-SA1侧翼。BamHIB片段与抗生链霉菌、红色链霉菌、变铅青链霉菌和其他链霉菌菌株的染色体DNA的多个片段杂交。它可能含有一个类IS元件或另一类分散的遗传元件。eSA1遗传元件的DNA序列包含与红色链霉菌NRRL 2338中Erm E基因序列同源的区域。

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