Research Group of Functional Genomics, Leibniz Institute of Farm Animal Biology, 18196 Dummerstorf, Germany.
Genet Sel Evol. 2011 Jun 24;43(1):24. doi: 10.1186/1297-9686-43-24.
During the past ten years many quantitative trait loci (QTL) affecting mastitis incidence and mastitis related traits like somatic cell score (SCS) were identified in cattle. However, little is known about the molecular architecture of QTL affecting mastitis susceptibility and the underlying physiological mechanisms and genes causing mastitis susceptibility. Here, a genome-wide expression analysis was conducted to analyze molecular mechanisms of mastitis susceptibility that are affected by a specific QTL for SCS on Bos taurus autosome 18 (BTA18). Thereby, some first insights were sought into the genetically determined mechanisms of mammary gland epithelial cells influencing the course of infection.
Primary bovine mammary gland epithelial cells (pbMEC) were sampled from the udder parenchyma of cows selected for high and low mastitis susceptibility by applying a marker-assisted selection strategy considering QTL and molecular marker information of a confirmed QTL for SCS in the telomeric region of BTA18. The cells were cultured and subsequently inoculated with heat-inactivated mastitis pathogens Escherichia coli and Staphylococcus aureus, respectively. After 1, 6 and 24 h, the cells were harvested and analyzed using the microarray expression chip technology to identify differences in mRNA expression profiles attributed to genetic predisposition, inoculation and cell culture.
Comparative analysis of co-expression profiles clearly showed a faster and stronger response after pathogen challenge in pbMEC from less susceptible animals that inherited the favorable QTL allele 'Q' than in pbMEC from more susceptible animals that inherited the unfavorable QTL allele 'q'. Furthermore, the results highlighted RELB as a functional and positional candidate gene and related non-canonical Nf-kappaB signaling as a functional mechanism affected by the QTL. However, in both groups, inoculation resulted in up-regulation of genes associated with the Ingenuity pathways 'dendritic cell maturation' and 'acute phase response signaling', whereas cell culture affected biological processes involved in 'cellular development'.
The results indicate that the complex expression profiling of pathogen challenged pbMEC sampled from cows inheriting alternative QTL alleles is suitable to study genetically determined molecular mechanisms of mastitis susceptibility in mammary epithelial cells in vitro and to highlight the most likely functional pathways and candidate genes underlying the QTL effect.
在过去的十年中,许多影响乳腺炎发病率和体细胞评分(SCS)等乳腺炎相关性状的数量性状基因座(QTL)已在牛中被鉴定出来。然而,对于影响乳腺炎易感性的 QTL 的分子结构以及导致乳腺炎易感性的潜在生理机制和基因知之甚少。在这里,进行了全基因组表达分析,以分析受 BTA18 上影响 SCS 的特定 QTL 影响的乳腺炎易感性的分子机制。因此,首次寻求了一些有关影响感染过程的乳腺上皮细胞遗传决定机制的见解。
从根据考虑 BTA18 端粒区 SCS 确认 QTL 的 QTL 和分子标记信息应用标记辅助选择策略选择的高和低乳腺炎易感性奶牛的乳房实质中采样原代牛乳腺上皮细胞(pbMEC)。将细胞培养并随后分别用热灭活的乳腺炎病原体大肠杆菌和金黄色葡萄球菌接种。接种后 1、6 和 24 小时收获细胞,并使用微阵列表达芯片技术分析 mRNA 表达谱的差异,这些差异归因于遗传易感性、接种和细胞培养。
共表达谱的比较分析清楚地表明,与从继承不利 QTL 等位基因“q”的更易感动物的 pbMEC 相比,遗传有利 QTL 等位基因“Q”的 pbMEC 对病原体的挑战表现出更快和更强的反应。此外,结果突出了 RELB 作为功能和位置候选基因,以及非经典 NF-kappaB 信号转导作为受 QTL 影响的功能机制。然而,在两组中,接种导致与 Ingenuity 途径“树突状细胞成熟”和“急性期反应信号”相关的基因上调,而细胞培养则影响与“细胞发育”相关的生物学过程。
结果表明,从继承替代 QTL 等位基因的奶牛中采样的受病原体挑战的 pbMEC 的复杂表达谱适合研究乳腺炎易感性的乳腺上皮细胞中遗传决定的分子机制,并突出了 QTL 效应背后最可能的功能途径和候选基因。