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将大鼠和黑腹果蝇细胞色素c的不变脯氨酸-30替换为丙氨酸或缬氨酸,相比于整体构象,对血红素裂隙的破坏作用更大。

Changing the invariant proline-30 of rat and Drosophila melanogaster cytochromes c to alanine or valine destabilizes the heme crevice more than the overall conformation.

作者信息

Koshy T I, Luntz T L, Schejter A, Margoliash E

机构信息

Department of Biochemistry, Molecular Biology and Cell Biology, Northwestern University, Evanston, IL 60208.

出版信息

Proc Natl Acad Sci U S A. 1990 Nov;87(22):8697-701. doi: 10.1073/pnas.87.22.8697.

Abstract

Drosophila melanogaster and rat cytochromes c in which proline-30 was converted to alanine or valine were expressed in a strain of baker's yeast, Saccharomyces cerevisiae, where they sustained aerobic growth. The mutations had no significant effect on the spectra or redox potentials but altered drastically the stability of the bond between the methionine-80 sulfur and the heme iron, as judged by four criteria: (i) the alkaline pKa values of the 695-nm band of the ferric form of the mutant proteins decreased by almost 1 pH unit as compared to the wild types; (ii) the acid pKa values increased by 0.5 to 1.2 pH units; (iii) the 695-nm band half-disappeared at temperatures 10-20 degrees C lower in the mutant proteins than in the wild types; and (iv) the 695-nm band of the mutant proteins was susceptible to concentrations of urea that had little influence on their overall structure. The valine-substituted rat cytochrome c had properties intermediate between those of the wild type and the alanine mutant. The destabilized coordinative bond is located in space a long distance from the mutation site. It is suggested that the mutations weaken the hydrogen bond between the carbonyl of residue 30 and the imino group of the imidazole of histidine-18, modifying the bonding of the heme iron by that imidazole, which, in turn, through a trans effect, weakens the bond between the heme iron and the other axial ligand, the sulfur of methionine-80. Alternatively, the effect of the mutations may be propagated allosterically along the peptide chain.

摘要

将脯氨酸-30 分别转换为丙氨酸或缬氨酸的果蝇和大鼠细胞色素 c,在一种面包酵母(酿酒酵母)菌株中表达,它们在该菌株中维持有氧生长。这些突变对光谱或氧化还原电位没有显著影响,但根据四个标准判断,它们极大地改变了甲硫氨酸-80 的硫与血红素铁之间键的稳定性:(i)与野生型相比,突变蛋白铁离子形式的 695nm 带的碱性 pKa 值降低了近 1 个 pH 单位;(ii)酸性 pKa 值增加了 0.5 至 1.2 个 pH 单位;(iii)突变蛋白在比野生型低 10 - 20 摄氏度的温度下,695nm 带半消失;(iv)突变蛋白的 695nm 带对尿素浓度敏感,而尿素浓度对其整体结构影响很小。缬氨酸取代的大鼠细胞色素 c 的性质介于野生型和丙氨酸突变体之间。不稳定的配位键在空间上距离突变位点很远。有人认为,这些突变削弱了残基 30 的羰基与组氨酸-18 的咪唑亚氨基之间的氢键,改变了该咪唑与血红素铁的键合,进而通过反式效应削弱了血红素铁与另一个轴向配体甲硫氨酸-80 的硫之间的键。或者,突变的影响可能通过变构沿着肽链传播。

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CREVICE STRUCTURES IN HEMOPROTEIN REACTIONS.血红蛋白反应中的裂隙结构
Proc Natl Acad Sci U S A. 1958 Oct 15;44(10):1013-29. doi: 10.1073/pnas.44.10.1013.
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Reverse turns in peptides and proteins.肽和蛋白质中的反向转角
CRC Crit Rev Biochem. 1980;8(4):315-99. doi: 10.3109/10409238009105470.
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Internal mobility of ferrocytochrome c.亚铁细胞色素c的内部迁移率
Nature. 1980 Oct 16;287(5783):659-60. doi: 10.1038/287659a0.
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Molecular dynamics of ferrocytochrome c.亚铁细胞色素c的分子动力学
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