National Center for Computational Toxiciology, Office of Research and Development, U.S. Environmental Protection Agency, Research Triangle Park, North Carolina, USA.
Environ Health Perspect. 2011 Nov;119(11):1596-603. doi: 10.1289/ehp.1103412. Epub 2011 Jul 25.
Understanding health risks to embryonic development from exposure to environmental chemicals is a significant challenge given the diverse chemical landscape and paucity of data for most of these compounds. High-throughput screening (HTS) in the U.S. Environmental Protection Agency (EPA) ToxCast™ project provides vast data on an expanding chemical library currently consisting of > 1,000 unique compounds across > 500 in vitro assays in phase I (complete) and Phase II (under way). This public data set can be used to evaluate concentration-dependent effects on many diverse biological targets and build predictive models of prototypical toxicity pathways that can aid decision making for assessments of human developmental health and disease.
We mined the ToxCast phase I data set to identify signatures for potential chemical disruption of blood vessel formation and remodeling.
ToxCast phase I screened 309 chemicals using 467 HTS assays across nine assay technology platforms. The assays measured direct interactions between chemicals and molecular targets (receptors, enzymes), as well as downstream effects on reporter gene activity or cellular consequences. We ranked the chemicals according to individual vascular bioactivity score and visualized the ranking using ToxPi (Toxicological Priority Index) profiles.
Targets in inflammatory chemokine signaling, the vascular endothelial growth factor pathway, and the plasminogen-activating system were strongly perturbed by some chemicals, and we found positive correlations with developmental effects from the U.S. EPA ToxRefDB (Toxicological Reference Database) in vivo database containing prenatal rat and rabbit guideline studies. We observed distinctly different correlative patterns for chemicals with effects in rabbits versus rats, despite derivation of in vitro signatures based on human cells and cell-free biochemical targets, implying conservation but potentially differential contributions of developmental pathways among species. Follow-up analysis with antiangiogenic thalidomide analogs and additional in vitro vascular targets showed in vitro activity consistent with the most active environmental chemicals tested here.
We predicted that blood vessel development is a target for environmental chemicals acting as putative vascular disruptor compounds (pVDCs) and identified potential species differences in sensitive vascular developmental pathways.
由于环境化学物质暴露对胚胎发育的健康风险存在多样性的化学物质和缺乏大多数这些化合物的数据,因此理解这些风险是一项重大挑战。美国环保署(EPA)ToxCast™项目中的高通量筛选(HTS)提供了大量的数据,这些数据来自一个不断扩大的化学库,目前包含超过 1000 种独特化合物,涵盖 500 多种体外分析方法,处于 I 期(完成)和 II 期(进行中)。这个公共数据集可用于评估多种不同生物靶标在浓度依赖性方面的影响,并构建典型毒性途径的预测模型,以帮助决策评估人类发育健康和疾病。
我们挖掘了 ToxCast 一期数据,以识别潜在化学物质对血管形成和重塑的干扰特征。
ToxCast 一期使用 467 个 HTS 分析方法,在 9 个分析技术平台上筛选了 309 种化学物质。这些分析方法测量了化学物质与分子靶标(受体、酶)之间的直接相互作用,以及对报告基因活性或细胞后果的下游影响。我们根据个体血管生物活性评分对化学物质进行排序,并使用 ToxPi(毒性优先指数)图谱可视化排序结果。
炎症趋化因子信号转导、血管内皮生长因子途径和纤溶酶原激活系统中的靶点受到一些化学物质的强烈干扰,我们发现与美国 EPA ToxRefDB(毒理学参考数据库)体内数据库中的发育效应呈正相关,该数据库包含了用于指导大鼠和兔的前瞻性研究。我们观察到在对兔子和大鼠有影响的化学物质之间存在明显不同的相关模式,尽管基于人类细胞和无细胞生化靶标推导体外特征,但这意味着物种之间的发育途径存在保守性,但可能存在差异。对具有血管生成抑制作用的沙利度胺类似物和其他体外血管靶标的后续分析表明,这些化合物具有与这里测试的最活跃环境化学物质一致的体外活性。
我们预测血管发育是环境化学物质作为潜在血管破坏化合物(pVDC)的作用靶点,并确定了敏感血管发育途径的潜在物种差异。