Section of Immunoregulation, Division of Innate Immunity, Leibniz-Center for Medicine and Biosciences, Borstel, Germany.
PLoS One. 2011;6(7):e21898. doi: 10.1371/journal.pone.0021898. Epub 2011 Jul 19.
On-going airway inflammation is characteristic for the pathophysiology of chronic obstructive pulmonary disease (COPD). However, the key factors determining the decrease in lung function, an important clinical parameter of COPD, are not clear. Genome-wide linkage analyses provide evidence for significant linkage to airway obstruction susceptibility loci on chromosome 8p23, the location of the human defensin gene cluster. Moreover, a genetic variation in the defensin beta 1 (DEFB1) gene was found to be associated with COPD. Therefore, we hypothesized that DEFB1 is differently regulated and expressed in human lungs during COPD progression. Gene expression of DEFB1 was assessed in bronchial epithelium and BAL fluid cells of healthy controls and patients with COPD and using bisulfite sequencing and ChIP analysis, the epigenetic control of DEFB1 mRNA expression was investigated. We can demonstrate that DEFB1 mRNA expression was significantly increased in bronchopulmonary specimen of patients with COPD (n = 34) vs. healthy controls (n = 10) (p<0.0001). Furthermore, a significant correlation could be detected between DEFB1 and functional parameters such as FEV(1) (p = 0.0024) and the FEV(1)/VC ratio (p = 0.0005). Upregulation of DEFB1 mRNA was paralleled by changes in HDAC1-3, HDAC5 and HDAC8 mRNA expression. Whereas bisulfite sequencing revealed no differences in the methylation state of DEFB1 promoter between patients with COPD and controls, ChIP analysis showed that enhanced DEFB1 mRNA expression was associated with the establishment of an active histone code. Thus, expression of human DEFB1 is upregulated and related to the decrease in pulmonary function in patients with COPD.
持续性气道炎症是慢性阻塞性肺疾病(COPD)病理生理学的特征。然而,导致肺功能下降的关键因素(COPD 的一个重要临床参数)尚不清楚。全基因组连锁分析为气道阻塞易感性基因座在 8p23 染色体上提供了证据,该位置是人类防御素基因簇的所在地。此外,还发现防御素 beta 1(DEFB1)基因的遗传变异与 COPD 有关。因此,我们假设在 COPD 进展过程中,DEFB1 在人类肺部的表达存在差异。我们评估了健康对照者和 COPD 患者的支气管上皮细胞和 BAL 液细胞中 DEFB1 的基因表达,并通过亚硫酸氢盐测序和 ChIP 分析研究了 DEFB1 mRNA 表达的表观遗传调控。我们可以证明,与健康对照组(n=10)相比,COPD 患者(n=34)的支气管肺标本中 DEFB1 mRNA 表达显著增加(p<0.0001)。此外,还可以检测到 DEFB1 与功能参数(如 FEV1(p=0.0024)和 FEV1/VC 比值(p=0.0005))之间存在显著相关性。DEFB1 mRNA 的上调与 HDAC1-3、HDAC5 和 HDAC8 mRNA 表达的变化平行。虽然亚硫酸氢盐测序显示 COPD 患者和对照组之间 DEFB1 启动子的甲基化状态没有差异,但 ChIP 分析表明,增强的 DEFB1 mRNA 表达与建立活性组蛋白密码有关。因此,人 DEFB1 的表达上调与 COPD 患者肺功能下降有关。