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[外显子组测序及其应用]

[Exome sequencing and its application].

作者信息

Zhang Xin, Li Min, Zhang Xue-Jun

机构信息

Institute of Dermatology of Anhui Medical University, Hefei 230032, China.

出版信息

Yi Chuan. 2011 Aug;33(8):847-56. doi: 10.3724/sp.j.1005.2011.00847.

Abstract

In recent years, researchers have identified a large number of complex diseases/traits-associated genetic variants by performing genome-wide association studies (GWAS), which may provide important clues on understanding the mechanisms of related diseases. However, GWAS has its own limitations in terms of being false positive, false negative results, very few SNPs located in the functional areas and insensitive to detect rare and structural variations, which results in the application limitation of this method. With the development of the next-generation sequencing technology, whole genome and exome sequencing developed rapidly and provide an opportunity for us to deal with the problem caused by GWAS. This high-throughput sequencing technology is applied for sequencing the exome (1% of genome) to discover most of the diseases-related variations in exons. Furthermore, it is highly effective to detect common and rare variations. Due to these advantages, exome sequencing has become a powerful and efficient strategy for identifying the genes responsible for mendelian disorders and complex diseases, which will be very helpful for the diseases clinical diagnosis.

摘要

近年来,研究人员通过开展全基因组关联研究(GWAS)鉴定出了大量与复杂疾病/性状相关的遗传变异,这可能为理解相关疾病的发病机制提供重要线索。然而,GWAS在假阳性、假阴性结果方面存在自身局限性,位于功能区的单核苷酸多态性(SNP)很少,且对检测罕见和结构变异不敏感,这导致该方法的应用受到限制。随着下一代测序技术的发展,全基因组和外显子组测序迅速发展,为我们解决GWAS引发的问题提供了契机。这种高通量测序技术用于对外显子组(基因组的1%)进行测序,以发现外显子中大多数与疾病相关的变异。此外,检测常见和罕见变异的效率很高。由于这些优势,外显子组测序已成为鉴定导致孟德尔疾病和复杂疾病的基因的强大而高效的策略,这将对疾病的临床诊断非常有帮助。

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