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2
Sparse inverse covariance estimation with the graphical lasso.使用图模型选择法进行稀疏逆协方差估计。
Biostatistics. 2008 Jul;9(3):432-41. doi: 10.1093/biostatistics/kxm045. Epub 2007 Dec 12.
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使用伪似然估计稀疏二元成对马尔可夫网络

Estimation of Sparse Binary Pairwise Markov Networks using Pseudo-likelihoods.

作者信息

Höfling Holger, Tibshirani Robert

机构信息

Department of Statistics, Stanford University, Stanford, CA 94305, USA.

出版信息

J Mach Learn Res. 2009 Apr 1;10:883-906.

PMID:21857799
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3157941/
Abstract

We consider the problems of estimating the parameters as well as the structure of binary-valued Markov networks. For maximizing the penalized log-likelihood, we implement an approximate procedure based on the pseudo-likelihood of Besag (1975) and generalize it to a fast exact algorithm. The exact algorithm starts with the pseudo-likelihood solution and then adjusts the pseudo-likelihood criterion so that each additional iterations moves it closer to the exact solution. Our results show that this procedure is faster than the competing exact method proposed by Lee, Ganapathi, and Koller (2006a). However, we also find that the approximate pseudo-likelihood as well as the approaches of Wainwright et al. (2006), when implemented using the coordinate descent procedure of Friedman, Hastie, and Tibshirani (2008b), are much faster than the exact methods, and only slightly less accurate.

摘要

我们考虑估计二值马尔可夫网络的参数以及结构的问题。为了最大化惩罚对数似然,我们基于Besag(1975)的伪似然实现了一种近似方法,并将其推广为一种快速精确算法。精确算法从伪似然解开始,然后调整伪似然准则,使得每次额外的迭代都使其更接近精确解。我们的结果表明,该过程比Lee、Ganapathi和Koller(2006a)提出的竞争精确方法更快。然而,我们也发现,当使用Friedman、Hastie和Tibshirani(2008b)的坐标下降过程实现时,近似伪似然以及Wainwright等人(2006)的方法比精确方法快得多,并且准确性只是略低。