Department of Physiology and Biophysics, Boston University School of Medicine, 700 Albany St., Boston, Massachusetts 02118-2526, USA.
Biochemistry. 2011 Sep 20;50(37):8078-89. doi: 10.1021/bi2006652. Epub 2011 Aug 24.
Human Npm2 is an ortholog of Xenopus nucleoplasmin (Np), a chaperone that binds histones. We have determined the crystal structure of a truncated Npm2-core at 1.9 Å resolution and show that the N-terminal domains of Npm2 and Np form similar pentamers. This allowed us to model an Npm2 decamer which may be formed by hydrogen bonds between quasi-conserved residues in the interface between two pentamers. Interestingly, the Npm2 pentamer lacks a prototypical A1-acidic tract in each of its subunits. This feature may be responsible for the inability of Npm2-core to bind histones. However, Npm2 with a large acidic tract in its C-terminal tail (Npm2-A2) is able to bind histones and form large complexes. Fluorescence resonance energy transfer experiments and biochemical analysis of loop mutations support the premise that nucleoplasmins form decamers when they bind H2A-H2B dimers and H3-H4 tetramers simultaneously. In the absence of histone tetramers, these chaperones bind H2A-H2B dimers with a single pentamer forming the central hub. When taken together, our data provide insights into the mechanism of histone binding by nucleoplasmins.
人 Npm2 是 Xenopus 核质蛋白(Np)的同源物,Np 是一种与组蛋白结合的伴侣蛋白。我们已经确定了截断的 Npm2 核心的晶体结构,分辨率为 1.9Å,并表明 Npm2 和 Np 的 N 端结构域形成相似的五聚体。这使我们能够构建 Npm2 十聚体模型,它可能是通过两个五聚体之间界面上准保守残基之间的氢键形成的。有趣的是,Npm2 五聚体在每个亚基中都缺乏典型的 A1 酸性结构域。这个特征可能是 Npm2-core 无法结合组蛋白的原因。然而,带有 C 端尾巴上大酸性结构域的 Npm2(Npm2-A2)能够结合组蛋白并形成大复合物。荧光共振能量转移实验和环突变的生化分析支持核质蛋白在同时结合 H2A-H2B 二聚体和 H3-H4 四聚体时形成十聚体的前提。在没有组蛋白四聚体的情况下,这些伴侣蛋白通过形成中央枢纽的单个五聚体结合 H2A-H2B 二聚体。总的来说,我们的数据为核质蛋白结合组蛋白的机制提供了新的见解。