• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用 CFSE 数据估计细胞增殖动力学的新模型。

A new model for the estimation of cell proliferation dynamics using CFSE data.

机构信息

Center for Research in Scientific Computation, North Carolina State University, Raleigh, NC 27695-8212, USA.

出版信息

J Immunol Methods. 2011 Oct 28;373(1-2):143-60. doi: 10.1016/j.jim.2011.08.014. Epub 2011 Aug 24.

DOI:10.1016/j.jim.2011.08.014
PMID:21889510
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3196292/
Abstract

CFSE analysis of a proliferating cell population is a popular tool for the study of cell division and divisionlinked changes in cell behavior. Recently Banks et al. (2011), Luzyanina et al. (2009), Luzyanina et al. (2007), a partial differential equation (PDE) model to describe lymphocyte dynamics in a CFSE proliferation assay was proposed. We present a significant revision of this model which improves the physiological understanding of several parameters. Namely, the parameter used previously as a heuristic explanation for the dilution of CFSE dye by cell division is replaced with a more physical component, cellular autofluorescence. The rate at which label decays is also quantified using a Gompertz decay process. We then demonstrate a revised method of fitting the model to the commonly used histogram representation of the data. It is shown that these improvements result in a model with a strong physiological basis which is fully capable of replicating the behavior observed in the data.

摘要

CFSE 分析是一种常用于研究细胞分裂和与分裂相关的细胞行为变化的增殖细胞群体分析方法。最近,Banks 等人(2011 年)、Luzyanina 等人(2009 年)、Luzyanina 等人(2007 年)提出了一个偏微分方程(PDE)模型来描述 CFSE 增殖实验中的淋巴细胞动力学。我们对该模型进行了重要的修订,改进了对几个参数的生理理解。具体来说,以前用于解释 CFSE 染料因细胞分裂而稀释的参数被更具物理意义的细胞自发荧光所取代。标签衰变的速率也使用 Gompertz 衰减过程进行量化。然后,我们演示了一种修订后的方法,将模型拟合到常用的直方图数据表示形式。结果表明,这些改进使模型具有很强的生理基础,能够完全复制数据中观察到的行为。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/237c896743e4/nihms321468f10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/c0c92936cd64/nihms321468f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/633730609f94/nihms321468f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/52bb9631b359/nihms321468f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/e1f9e54209ab/nihms321468f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/348344d9c4cf/nihms321468f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/35d47296b206/nihms321468f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/7511d5507b7c/nihms321468f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/3bde36ce644a/nihms321468f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/08a035342fed/nihms321468f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/237c896743e4/nihms321468f10.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/c0c92936cd64/nihms321468f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/633730609f94/nihms321468f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/52bb9631b359/nihms321468f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/e1f9e54209ab/nihms321468f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/348344d9c4cf/nihms321468f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/35d47296b206/nihms321468f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/7511d5507b7c/nihms321468f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/3bde36ce644a/nihms321468f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/08a035342fed/nihms321468f9.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/53ed/3196292/237c896743e4/nihms321468f10.jpg

相似文献

1
A new model for the estimation of cell proliferation dynamics using CFSE data.利用 CFSE 数据估计细胞增殖动力学的新模型。
J Immunol Methods. 2011 Oct 28;373(1-2):143-60. doi: 10.1016/j.jim.2011.08.014. Epub 2011 Aug 24.
2
The use of carboxyfluorescein diacetate succinimidyl ester (CFSE) to monitor lymphocyte proliferation.使用羧基荧光素二乙酸琥珀酰亚胺酯(CFSE)监测淋巴细胞增殖。
J Vis Exp. 2010 Oct 12(44):2259. doi: 10.3791/2259.
3
Analysing cell division in vivo and in vitro using flow cytometric measurement of CFSE dye dilution.使用羧基荧光素二乙酸琥珀酰亚胺酯(CFSE)染料稀释的流式细胞术测量在体内和体外分析细胞分裂。
J Immunol Methods. 2000 Sep 21;243(1-2):147-54. doi: 10.1016/s0022-1759(00)00231-3.
4
Quantifying lymphocyte kinetics in vivo using carboxyfluorescein diacetate succinimidyl ester (CFSE).使用羧基荧光素二乙酸琥珀酰亚胺酯(CFSE)在体内定量淋巴细胞动力学。
Proc Biol Sci. 2006 May 7;273(1590):1165-71. doi: 10.1098/rspb.2005.3432.
5
Estimation of cell proliferation dynamics using CFSE data.使用 CFSE 数据估计细胞增殖动力学。
Bull Math Biol. 2011 Jan;73(1):116-50. doi: 10.1007/s11538-010-9524-5. Epub 2010 Mar 3.
6
A division-dependent compartmental model for computing cell numbers in CFSE-based lymphocyte proliferation assays.基于 CFSE 的淋巴细胞增殖试验中计算细胞数的与分裂相关的区室模型。
Math Biosci Eng. 2012 Oct;9(4):699-736. doi: 10.3934/mbe.2012.9.699.
7
Numerical modelling of label-structured cell population growth using CFSE distribution data.使用CFSE分布数据对标记结构细胞群体生长进行数值建模。
Theor Biol Med Model. 2007 Jul 24;4:26. doi: 10.1186/1742-4682-4-26.
8
Fluorescent dyes for lymphocyte migration and proliferation studies.用于淋巴细胞迁移和增殖研究的荧光染料。
Immunol Cell Biol. 1999 Dec;77(6):499-508. doi: 10.1046/j.1440-1711.1999.00877.x.
9
Measuring lymphocyte proliferation, survival and differentiation using CFSE time-series data.利用CFSE时间序列数据测量淋巴细胞增殖、存活和分化。
Nat Protoc. 2007;2(9):2057-67. doi: 10.1038/nprot.2007.297.
10
Carboxyfluorescein diacetate succinimidyl ester and the virgin lymphocyte: a marriage made in heaven.羧基荧光素二乙酸琥珀酰亚胺酯与初始淋巴细胞:天作之合。
Immunol Cell Biol. 1999 Dec;77(6):530-8. doi: 10.1046/j.1440-1711.1999.00871.x.

引用本文的文献

1
Integration of quantitative methods and mathematical approaches for the modeling of cancer cell proliferation dynamics.整合定量方法和数学方法,用于癌症细胞增殖动力学的建模。
Am J Physiol Cell Physiol. 2023 Feb 1;324(2):C247-C262. doi: 10.1152/ajpcell.00185.2022. Epub 2022 Dec 12.
2
Hydroxytyrosol Inhibits MDSCs and Promotes M1 Macrophages in Mice With Orthotopic Pancreatic Tumor.羟基酪醇抑制原位胰腺肿瘤小鼠的髓源性抑制细胞并促进M1巨噬细胞
Front Pharmacol. 2021 Nov 11;12:759172. doi: 10.3389/fphar.2021.759172. eCollection 2021.
3
Prediction of PD-L1 inhibition effects for HIV-infected individuals.

本文引用的文献

1
Label Structured Cell Proliferation Models.标记结构化细胞增殖模型。
Appl Math Lett. 2010 Dec 1;23(12):1412-1415. doi: 10.1016/j.aml.2010.07.009.
2
An age-dependent branching process model for the analysis of CFSE-labeling experiments.用于分析 CFSE 标记实验的与年龄相关的分支过程模型。
Biol Direct. 2010 Jun 22;5:41. doi: 10.1186/1745-6150-5-41.
3
Estimation of cell proliferation dynamics using CFSE data.使用 CFSE 数据估计细胞增殖动力学。
预测 HIV 感染者对 PD-L1 抑制作用的影响。
PLoS Comput Biol. 2019 Nov 6;15(11):e1007401. doi: 10.1371/journal.pcbi.1007401. eCollection 2019 Nov.
4
BA71ΔCD2: a New Recombinant Live Attenuated African Swine Fever Virus with Cross-Protective Capabilities.BA71ΔCD2:一种具有交叉保护能力的新型重组减毒非洲猪瘟病毒
J Virol. 2017 Oct 13;91(21). doi: 10.1128/JVI.01058-17. Print 2017 Nov 1.
5
Estimates and impact of lymphocyte division parameters from CFSE data using mathematical modelling.使用数学模型从CFSE数据估计淋巴细胞分裂参数及其影响。
PLoS One. 2017 Jun 16;12(6):e0179768. doi: 10.1371/journal.pone.0179768. eCollection 2017.
6
Live attenuated African swine fever viruses as ideal tools to dissect the mechanisms involved in viral pathogenesis and immune protection.减毒活非洲猪瘟病毒是剖析病毒致病机制和免疫保护机制的理想工具。
Vet Res. 2015 Nov 20;46:135. doi: 10.1186/s13567-015-0275-z.
7
Simultaneous analysis of p53 protein expression and cell proliferation in irradiated human lymphocytes by flow cytometry.应用流式细胞术同时分析人淋巴细胞中 p53 蛋白表达与细胞增殖。
Dose Response. 2013 Aug 27;12(1):110-20. doi: 10.2203/dose-response.13-015.Silva. eCollection 2014 Jan.
8
Mathematical models for CFSE labelled lymphocyte dynamics: asymmetry and time-lag in division.CFSE标记淋巴细胞动力学的数学模型:分裂中的不对称性和时间延迟
J Math Biol. 2014 Dec;69(6-7):1547-83. doi: 10.1007/s00285-013-0741-z. Epub 2013 Dec 13.
9
A novel statistical analysis and interpretation of flow cytometry data.一种新型的流式细胞术数据分析与解释的统计方法。
J Biol Dyn. 2013;7(1):96-132. doi: 10.1080/17513758.2013.812753.
10
FlowMax: A Computational Tool for Maximum Likelihood Deconvolution of CFSE Time Courses.FlowMax:用于CFSE时间进程最大似然反卷积的计算工具。
PLoS One. 2013 Jun 27;8(6):e67620. doi: 10.1371/journal.pone.0067620. Print 2013.
Bull Math Biol. 2011 Jan;73(1):116-50. doi: 10.1007/s11538-010-9524-5. Epub 2010 Mar 3.
4
The effect of correlations on the population dynamics of lymphocytes.相关性对淋巴细胞群体动态的影响。
J Theor Biol. 2010 May 21;264(2):443-9. doi: 10.1016/j.jtbi.2010.02.019. Epub 2010 Feb 19.
5
A single-cell pedigree analysis of alternative stochastic lymphocyte fates.替代性随机淋巴细胞命运的单细胞谱系分析
Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13457-62. doi: 10.1073/pnas.0905629106. Epub 2009 Jul 24.
6
Distributed parameter identification for a label-structured cell population dynamics model using CFSE histogram time-series data.使用CFSE直方图时间序列数据对标签结构细胞群体动力学模型进行分布式参数识别。
J Math Biol. 2009 Nov;59(5):581-603. doi: 10.1007/s00285-008-0244-5. Epub 2008 Dec 19.
7
On the impact of correlation between collaterally consanguineous cells on lymphocyte population dynamics.关于旁系血亲细胞间相关性对淋巴细胞群体动态的影响。
J Math Biol. 2009 Aug;59(2):255-85. doi: 10.1007/s00285-008-0231-x. Epub 2008 Oct 28.
8
Tracking antigen-driven responses by flow cytometry: monitoring proliferation by dye dilution.通过流式细胞术追踪抗原驱动的反应:通过染料稀释监测增殖。
Cytometry A. 2008 Nov;73(11):1019-34. doi: 10.1002/cyto.a.20619.
9
Advanced application of CFSE for cellular tracking.羧基荧光素二乙酸琥珀酰亚胺酯在细胞追踪中的高级应用。
Curr Protoc Cytom. 2008 Apr;Chapter 9:Unit9.25. doi: 10.1002/0471142956.cy0925s44.
10
Quantitative regulation of B cell division destiny by signal strength.信号强度对B细胞分裂命运的定量调控。
J Immunol. 2008 Jul 1;181(1):374-82. doi: 10.4049/jimmunol.181.1.374.