Department of Biological Sciences, University of Naples Federico II, via Mezzocannone 8, 80134 Naples, Italy.
Dev Genes Evol. 2011 Oct;221(4):241-6. doi: 10.1007/s00427-011-0372-6. Epub 2011 Sep 4.
The class B MADS-box genes belong to two distinct functional groups: the AP3/DEF-like and the PI/GLO-like sub-families. In orchids, AP3/DEF-like genes are present in four copies, each with a different role in floral organ formation, which is described in the "orchid code" model. Interestingly, the orchid PI/GLO-like genes are present in two copies in Orchidinae, whereas they are described as single copy in the other orchid lineages. The two PI/GLO-like paralogs have site-specific different selective constraints; in addition, they show relaxation of purifying selection when compared to the single-copy lineages. In this study, we present a comparative analysis of the expression patterns of the two PI/GLO-like paralogs, OrcPI and OrcPI2, in floral tissues of Orchis italica in different developmental stages using real-time PCR. The two genes show similar expression profiles in the tissue examined, with differences detectable between immature and mature inflorescence. In all cases, OrcPI2 is expressed at a higher level than OrcPI. Real-time PCR results reveal that the co-expression of the two duplicated loci could have a fully or partially redundant function. The possible evolutionary fate of OrcPI and OrcPI2 is discussed as well as their involvement in ovary development.
B 类 MADS 框基因属于两个不同的功能群:AP3/DEF 类和 PI/GLO 类亚家族。在兰花中,AP3/DEF 类基因有 4 个拷贝,每个拷贝在花器官形成中都有不同的作用,这在“兰花密码”模型中有所描述。有趣的是,兰花 PI/GLO 类基因在 Orchidinae 中有 2 个拷贝,而在其他兰花谱系中则被描述为单拷贝。这两个 PI/GLO 类的旁系同源物具有特定于位点的不同选择约束;此外,与单拷贝谱系相比,它们表现出纯化选择的放松。在这项研究中,我们使用实时 PCR 对不同发育阶段的意大利兰花(Orchis italica)花组织中两个 PI/GLO 类旁系同源物(OrcPI 和 OrcPI2)的表达模式进行了比较分析。这两个基因在研究的组织中表现出相似的表达模式,在未成熟和成熟花序之间可以检测到差异。在所有情况下,OrcPI2 的表达水平都高于 OrcPI。实时 PCR 结果表明,两个重复基因座的共表达可能具有完全或部分冗余功能。还讨论了 OrcPI 和 OrcPI2 的可能进化命运及其在卵巢发育中的作用。