le Maire Albane, Gelin Muriel, Pochet Sylvie, Hoh François, Pirocchi Michel, Guichou Jean François, Ferrer Jean Luc, Labesse Gilles
Université Montpellier 1 et 2, Centre de Biochimie Structurale, France.
Acta Crystallogr D Biol Crystallogr. 2011 Sep;67(Pt 9):747-55. doi: 10.1107/S0907444911023249. Epub 2011 Aug 9.
X-ray crystallography is now a recognized technique for ligand screening, especially for fragment-based drug design. However, protein crystal handling is still tedious and limits further automation. An alternative method for the solution of crystal structures of proteins in complex with small ligands is proposed. Crystallization drops are directly exposed to an X-ray beam after cocrystallization or soaking with the desired ligands. The use of dedicated plates in connection with an optimal parametrization of the G-rob robot allows efficient data collection. Three proteins currently under study in our laboratory for ligand screening by X-ray crystallography were used as validation test cases. The protein crystals belonged to different space groups, including a challenging monoclinic case. The resulting diffraction data can lead to clear ligand recognition, including indication of alternating conformations. These results demonstrate a possible method for automation of ligand screening by X-ray crystallography.
X射线晶体学如今是一种公认的配体筛选技术,尤其适用于基于片段的药物设计。然而,蛋白质晶体处理仍然繁琐,限制了进一步的自动化。本文提出了一种用于解析与小配体结合的蛋白质晶体结构的替代方法。在与所需配体共结晶或浸泡后,结晶液滴直接暴露于X射线束下。使用专用板并结合G-rob机器人的最佳参数设置,可实现高效的数据收集。我们实验室目前正在通过X射线晶体学进行配体筛选研究的三种蛋白质被用作验证测试案例。蛋白质晶体属于不同的空间群,包括一个具有挑战性的单斜晶案例。所得的衍射数据能够清晰地识别配体,包括交替构象的指示。这些结果证明了一种通过X射线晶体学实现配体筛选自动化的可能方法。