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RNAcentral:建立国际 RNA 序列数据库的愿景。

RNAcentral: A vision for an international database of RNA sequences.

出版信息

RNA. 2011 Nov;17(11):1941-6. doi: 10.1261/rna.2750811. Epub 2011 Sep 22.

Abstract

During the last decade there has been a great increase in the number of noncoding RNA genes identified, including new classes such as microRNAs and piRNAs. There is also a large growth in the amount of experimental characterization of these RNA components. Despite this growth in information, it is still difficult for researchers to access RNA data, because key data resources for noncoding RNAs have not yet been created. The most pressing omission is the lack of a comprehensive RNA sequence database, much like UniProt, which provides a comprehensive set of protein knowledge. In this article we propose the creation of a new open public resource that we term RNAcentral, which will contain a comprehensive collection of RNA sequences and fill an important gap in the provision of biomedical databases. We envision RNA researchers from all over the world joining a federated RNAcentral network, contributing specialized knowledge and databases. RNAcentral would centralize key data that are currently held across a variety of databases, allowing researchers instant access to a single, unified resource. This resource would facilitate the next generation of RNA research and help drive further discoveries, including those that improve food production and human and animal health. We encourage additional RNA database resources and research groups to join this effort. We aim to obtain international network funding to further this endeavor.

摘要

在过去的十年中,鉴定出的非编码 RNA 基因数量大幅增加,包括 microRNAs 和 piRNAs 等新类别。对这些 RNA 成分的实验特性的研究也在大量增加。尽管信息量在增长,但研究人员仍然难以获取 RNA 数据,因为尚未创建非编码 RNA 的关键数据资源。最紧迫的遗漏是缺乏像 UniProt 那样的全面 RNA 序列数据库,后者提供了一套全面的蛋白质知识。在本文中,我们提出创建一个新的开放公共资源,我们称之为 RNAcentral,它将包含一个全面的 RNA 序列集合,并填补生物医学数据库提供方面的一个重要空白。我们设想来自世界各地的 RNA 研究人员加入联合的 RNAcentral 网络,提供专业知识和数据库。RNAcentral 将集中目前在各种数据库中持有的关键数据,使研究人员能够即时访问单一、统一的资源。该资源将促进下一代 RNA 研究,并有助于推动进一步的发现,包括那些提高粮食生产和人类及动物健康的发现。我们鼓励其他 RNA 数据库资源和研究小组加入这一努力。我们旨在获得国际网络资金来进一步推动这一事业。

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