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《Cyclops kolensis(甲壳纲,桡足类)种系基因组大小的异常扩增:进一步支持染色质缩减修正模型的证据》

Unusual augmentation of germline genome size in Cyclops kolensis (Crustacea, Copepoda): further evidence in support of a revised model of chromatin diminution.

机构信息

Department of Biology, James Madison University, Harrisonburg, VA 22807, USA.

出版信息

Chromosome Res. 2011 Oct;19(7):911-23. doi: 10.1007/s10577-011-9234-3.

DOI:10.1007/s10577-011-9234-3
PMID:21953028
Abstract

Embryonic chromatin diminution, the selective excision of large amounts of heterochromatic DNA from presomatic cell lineages, provides an example of an unusually large augmentation of the germline genome and raises questions regarding the source of the increased amount of DNA and its relevance to the biology of the organism. DNA levels in adult germ cell nuclei of the copepod Cyclops kolensis were determined by DNA-Feulgen cytophotometry and compared with those of somatic nuclei of adults and both pre- and postdiminuted embryos from the same mothers. Almost 75 pg DNA/nucleus is excised by diminution, resulting in the return of each generation to the approximately 1 pg DNA/nucleus level found for adult soma. To account for the increase in DNA levels of germ cells observed here, we propose alternative hypotheses to the original model of chromatin diminution: (1) repetitive endocycles or (2) proliferation of genetic elements. Specific tests for these hypotheses using next-generation sequencing and quantitative cytophotometry, as well as the functional significance of germ cell DNA augmentation to the copepod, are discussed.

摘要

胚胎染色质消减,即从体前体细胞谱系中选择性地切除大量异染色质 DNA,为生殖系基因组的异常大量扩增提供了一个范例,并提出了关于增加的 DNA 来源及其与生物体生物学相关性的问题。通过 DNA-Feulgen 细胞光度术测定了桡足类 Cyclops kolensis 的成体生殖细胞核中的 DNA 水平,并与来自同一母体的成体体细胞核以及前减和后减胚胎的 DNA 水平进行了比较。通过消减大约有 75pg 的 DNA/核被切除,导致每一代都回到了成体躯体中发现的大约 1pg DNA/核的水平。为了解释这里观察到的生殖细胞 DNA 水平的增加,我们提出了对染色质消减原始模型的替代假设:(1)重复内周期或(2)遗传元件的增殖。我们使用下一代测序和定量细胞光度术对这些假设进行了具体测试,并讨论了对桡足类动物生殖细胞 DNA 扩增的功能意义。

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