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罗氏附生菌属,新属,一种从南极淡水湖中分离到的具有附属物的细菌。

Rhodoligotrophos appendicifer gen. nov., sp. nov., an appendaged bacterium isolated from a freshwater Antarctic lake.

机构信息

Department of Biotechnology, College of Life Sciences, Ritsumeikan University, 1-1-1 Nojihigashi, Kusatsu, Shiga 525-8577, Japan.

Department of Synthetic Chemistry and Biological Chemistry, Graduate School of Engineering, Kyoto University, Katsura, Nishikyo-ku, Kyoto 615-8510, Japan.

出版信息

Int J Syst Evol Microbiol. 2012 Aug;62(Pt 8):1945-1950. doi: 10.1099/ijs.0.032953-0. Epub 2011 Oct 14.

Abstract

A Gram-stain-negative, non-spore-forming, non-motile, irregularly circular, aerobic/microaerobic appendaged bacterium (strain 120-1(T)) was isolated from Naga-ike, one of the freshwater lakes in the Skarvsnes ice-free area of Antarctica. Strain 120-1(T) grew between 5 and 35 °C, with optimum growth at 30 °C. The pH range for growth was between 6.0 and 9.0 (optimum of approximately pH 7.0). The range of NaCl concentration allowing growth of strain 120-1(T) was between 0 and 5.0%, with an optimum of 0.5-1.0%. Strain 120-1(T) was able to utilize organic compounds such as glucose, arabinose, gluconate, adipate and malate. Red colonies were formed on plate medium and the carotenoids were present in the cells. Ubiquinones Q-9 and Q-10 were the major respiratory quinones. The major cellular fatty acids were C(16:0), C(18:1)ω9c and C(18:1)ω7c. The G+C content of the genomic DNA was 61.1 mol%. Comparative analyses of 16S rRNA gene sequences and physiological characteristics of strain 120-1(T) indicate that strain 120-1(T) is a phylogenetically novel bacterium, and that it represents a novel species in a new genus, Rhodoligotrophos gen. nov., in the order Rhizobiales, family Rhodobiaceae. The name Rhodoligotrophos appendicifer gen. nov. sp. nov. is proposed as the type species of this new genus, with 120-1(T) ( = JCM 16873(T) = ATCC BAA-2115(T)) as the type strain.

摘要

一株革兰氏阴性、不产芽孢、不运动、不规则圆形、需氧/微需氧、具附属物的细菌(120-1(T) 株)从南极洲斯卡维斯内斯无冰区的纳加依克湖(Naga-ike)中分离得到。120-1(T) 株在 5 到 35°C 之间生长,最佳生长温度为 30°C。其生长的 pH 值范围为 6.0 到 9.0(最佳 pH 值约为 7.0)。允许 120-1(T) 株生长的 NaCl 浓度范围为 0 到 5.0%,最佳浓度为 0.5-1.0%。120-1(T) 株能够利用葡萄糖、阿拉伯糖、葡糖酸盐、己二酸和苹果酸等有机化合物。在平板培养基上形成红色菌落,细胞中存在类胡萝卜素。其主要呼吸醌为泛醌 Q-9 和 Q-10。主要细胞脂肪酸为 C(16:0)、C(18:1)ω9c 和 C(18:1)ω7c。基因组 DNA 的 G+C 含量为 61.1 mol%。基于 16S rRNA 基因序列的比较分析和 120-1(T) 株的生理特性,表明该菌株是一株系统发育上新颖的细菌,代表了根瘤菌目(Rhizobiales)、红杆菌科(Rhodobiaceae)中一个新属——Rhodoligotrophos 属的一个新种。提议将 Rhodoligotrophos appendicifer gen. nov. sp. nov. 作为该新属的模式种,120-1(T) 株(=JCM 16873(T)=ATCC BAA-2115(T))作为模式菌株。

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