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水生塔比里齐科氏菌属,新属新种,一种从伊朗大不里士市附近的 Qurugöl 湖分离到的新型 α-变形菌。

Tabrizicola aquatica gen. nov. sp. nov., a novel alphaproteobacterium isolated from Qurugöl Lake nearby Tabriz city, Iran.

机构信息

Faculty of Pharmacy, Tabriz University of Medical Sciences, Tabriz, Iran.

出版信息

Antonie Van Leeuwenhoek. 2013 Dec;104(6):1205-15. doi: 10.1007/s10482-013-0042-y. Epub 2013 Oct 25.

Abstract

A novel Gram-negative, aerobic, non-motile and rod-shaped bacterium was isolated from Qurugöl Lake near Tabriz city. The bacterium grew chemoorganolheterotrophically and chemolithoautotrophically. However, photo-organoheterotrophic, photo-lithoautotrophic and fermentative growth could not be demonstrated. The presence of photosynthesis genes pufL and pufM was not shown and photosynthesis pigments were not formed. Strain RCRI19(T) grew without NaCl and tolerated up to 3 % NaCl. Growth occurred at pH 6-9 (optimum, pH 7) and 15-55 °C (optimum 40-45 °C). Vitamins were not required for growth. The major fatty acids are C18:1 ω7C, 11-methyl C18:1 ω7C, C18:0 3-OH. The predominant respiratory quinone is ubiquinone Q-10. The G+C content of genomic DNA is 65.9 mol%. Analysis of 16S rRNA sequences showed that strain RCRI19(T) has the highest similarities with uncultured environmental sequences followed by members of the genera Rhodobacter (≤95.75 %), Haematobacter (≤95.53 %), Gemmobacter (≤95.17 %) and Falsirhodobacter (94.60 %) in the family Rhodobacteraceae. DNA-DNA relatedness between strain RCRI19(T) and the closest phylogenetically related strain, Rhodobacter blasticus LMG 4305(T), was 20 %. Based on its phenotypic and chemotaxonomic characteristics and considering that it does not form photosynthetic pigments and is unable to grow phototrophically, it is concluded that strain RCRI19(T) cannot be included into the genus Rhodobacter and any of the other related genera. Therefore, we propose to place the new bacterium into a new genus and species for which the name Tabrizicola aquatica gen. nov. and sp. nov. is proposed. The type strain is RCRI19(T) (=BCCM/LMG 25773(T )= JCM 17277(T )= KCTC 23724(T)).

摘要

一种新的革兰氏阴性、需氧、非运动和杆状细菌从大不里士市附近的 Qurugöl 湖分离得到。该细菌能够进行化能异养和化能自养生长。然而,不能证明其具有光能异养、光能自养和发酵生长的能力。也没有显示存在光合作用基因 pufL 和 pufM,并且没有形成光合作用色素。菌株 RCRI19(T) 可以在没有 NaCl 的情况下生长,并且可以耐受高达 3%的 NaCl。其生长的 pH 值范围为 6-9(最佳 pH 值为 7),温度范围为 15-55°C(最佳温度为 40-45°C)。生长不需要维生素。主要脂肪酸为 C18:1 ω7C、11-甲基 C18:1 ω7C、C18:0 3-OH。主要呼吸醌为泛醌 Q-10。基因组 DNA 的 G+C 含量为 65.9 mol%。16S rRNA 序列分析表明,菌株 RCRI19(T) 与未培养的环境序列具有最高的相似性,其次是红杆菌科的 Rhodobacter(≤95.75%)、Haematobacter(≤95.53%)、Gemmobacter(≤95.17%)和 Falsirhodobacter(94.60%)属。菌株 RCRI19(T) 与亲缘关系最近的模式菌株 Rhodobacter blasticus LMG 4305(T) 之间的 DNA-DNA 同源性为 20%。基于其表型和化学分类特征,并且考虑到它不形成光合色素并且不能进行光能生长,因此可以得出结论,菌株 RCRI19(T) 不能归入红杆菌属或任何其他相关属。因此,我们建议将新细菌归入一个新属和种,命名为 Tabrizicola aquatica 属和种。模式菌株为 RCRI19(T)(=BCCM/LMG 25773(T)=JCM 17277(T)=KCTC 23724(T))。

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