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微生物对不同大小类别的有机碳的偏好:来自南极雪的研究。

Microbial preference for different size classes of organic carbon: a study from Antarctic snow.

机构信息

National Centre for Antarctic and Ocean Research, Headland Sada, Vasco-da-Gama, Goa 403 804, India.

出版信息

Environ Monit Assess. 2012 Oct;184(10):5929-43. doi: 10.1007/s10661-011-2391-1. Epub 2011 Oct 26.

Abstract

Significance of carbon cycling in polar ecosystems is well recognized. Yet, bacteria in surface snow have received less attention in terms of their potential in carbon cycling. Here, we present results on carbon utilization by bacterial communities in three surface snow samples from Antarctica collected along a coastal to inland transect. Microcosm studies were conducted over 8 days at 5 ± 1°C to study carbon metabolism in different combinations of added low molecular weight (LMW (glucose, <1 kDa)) and high molecular weight (HMW (starch, >1 kDa)) substrates (final 20 ppm). The total organic carbon (TOC) in the snow samples decreased with time at rates ranging from non-detectable to 1.4 ppm day(-1) with rates highest in snow samples from inland region. In addition, carbon utilization studies were also carried out with bacterial isolates LH1, LH2, and LH4 belonging to the genus Cellulosimicrobium, Bacillus, and Ralstonia, respectively, isolated from the snow samples. Studies with strain LH2 in different amendments of glucose and starch showed that TOC decreased with time in all amendments at a rate of 0.9-1.5 ppm day(-1) with highest rates of 1.4-1.5 ppm day(-1) in amendments containing a higher proportion of starch. The bacterial isolates were also studied to determine their ability to utilize other LMW and HMW compounds. They utilized diverse substrates like carbohydrates, amino acids, amines, amides, complex polymers, etc., of molecular mass <100 Da, 100-500 Da, >500 Da-1 kDa, and >1 kDa preferring (up to 31 times) substrates with mass of >1 kDa than <1 kDa. The ability of bacteria in snow to utilize diverse LMW and HMW substrates indicates that they could be important in the uptake of similar compounds in snow and therefore potentially govern snow chemistry.

摘要

极地生态系统中的碳循环意义重大。然而,与碳循环的潜在作用相比,人们对表层雪中的细菌关注较少。在这里,我们展示了从南极洲沿海到内陆的三个表层雪中细菌群落利用碳的结果。在 5 ± 1°C 的条件下进行了为期 8 天的微宇宙研究,以研究不同添加低分子量 (LMW(葡萄糖,<1 kDa)和高分子量 (HMW(淀粉,>1 kDa)底物组合下的碳代谢 (最终 20 ppm)。雪样中的总有机碳 (TOC) 随时间呈下降趋势,下降速率范围从不可检测到 1.4 ppm·d-1,内陆地区雪样的下降速率最高。此外,还对从雪样中分离出的属于纤维单胞菌属、芽孢杆菌属和罗尔斯顿菌属的细菌分离株 LH1、LH2 和 LH4 进行了碳利用研究。在不同葡萄糖和淀粉添加物中对菌株 LH2 的研究表明,在所有添加物中,TOC 随时间以 0.9-1.5 ppm·d-1 的速率下降,在含有较高比例淀粉的添加物中,下降速率最高为 1.4-1.5 ppm·d-1。还研究了这些细菌分离株利用其他 LMW 和 HMW 化合物的能力。它们利用各种低分子量和高分子量的化合物,如<100 Da、100-500 Da、>500 Da-1 kDa 和>1 kDa 的碳水化合物、氨基酸、胺、酰胺、复杂聚合物等,对>1 kDa 的化合物的偏好程度(高达 31 倍)高于<1 kDa 的化合物。雪层中细菌利用多种 LMW 和 HMW 底物的能力表明,它们在雪层中吸收类似化合物方面可能很重要,因此可能控制着雪的化学性质。

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