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Ensembl Genomes:一个整合了非脊椎动物物种基因组规模数据的资源。

Ensembl Genomes: an integrative resource for genome-scale data from non-vertebrate species.

机构信息

Wellcome Trust Genome Campus, Hinxton, Cambridge CB10 1SD, UK.

出版信息

Nucleic Acids Res. 2012 Jan;40(Database issue):D91-7. doi: 10.1093/nar/gkr895. Epub 2011 Nov 8.

Abstract

Ensembl Genomes (http://www.ensemblgenomes.org) is an integrative resource for genome-scale data from non-vertebrate species. The project exploits and extends technology (for genome annotation, analysis and dissemination) developed in the context of the (vertebrate-focused) Ensembl project and provides a complementary set of resources for non-vertebrate species through a consistent set of programmatic and interactive interfaces. These provide access to data including reference sequence, gene models, transcriptional data, polymorphisms and comparative analysis. Since its launch in 2009, Ensembl Genomes has undergone rapid expansion, with the goal of providing coverage of all major experimental organisms, and additionally including taxonomic reference points to provide the evolutionary context in which genes can be understood. Against the backdrop of a continuing increase in genome sequencing activities in all parts of the tree of life, we seek to work, wherever possible, with the communities actively generating and using data, and are participants in a growing range of collaborations involved in the annotation and analysis of genomes.

摘要

Ensembl Genomes(http://www.ensemblgenomes.org)是一个整合的非脊椎动物物种基因组规模数据资源。该项目利用并扩展了在(以脊椎动物为重点的)Ensembl 项目背景下开发的技术(用于基因组注释、分析和传播),并通过一组一致的编程和交互式接口为非脊椎动物物种提供了一组互补的资源。这些资源提供了对包括参考序列、基因模型、转录数据、多态性和比较分析在内的数据的访问。自 2009 年推出以来,Ensembl Genomes 经历了快速扩张,其目标是提供所有主要实验生物的覆盖范围,并增加分类学参考点,以提供可以理解基因的进化背景。在生命之树各个部分的基因组测序活动持续增加的背景下,我们寻求尽可能与积极生成和使用数据的社区合作,并参与越来越多的涉及基因组注释和分析的合作。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f265/3245118/b7357f14c164/gkr895f1.jpg

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