Suppr超能文献

新德里金属β-内酰胺酶1(NDM-1)的结构

Structure of New Delhi metallo-β-lactamase 1 (NDM-1).

作者信息

Green Victoria L, Verma Anil, Owens Raymond J, Phillips Simon E V, Carr Stephen B

机构信息

Research Complex at Harwell, Rutherford Appleton Laboratory, Harwell Oxford, Didcot, Oxon OX11 0FA, England.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Oct 1;67(Pt 10):1160-4. doi: 10.1107/S1744309111029654. Epub 2011 Sep 6.

Abstract

Antibiotic resistance in bacterial pathogens poses a serious threat to human health and the metallo-β-lactamase (MBL) enzymes are responsible for much of this resistance. The recently identified New Delhi MBL 1 (NDM-1) is a novel member of this family that is capable of hydrolysing a wide variety of clinically important antibiotics. Here, the crystal structure of NDM-1 from Klebsiella pneumoniae is reported and its structure and active site are discussed in the context of other recently deposited coordinates of NDM-1.

摘要

细菌病原体中的抗生素耐药性对人类健康构成严重威胁,金属β-内酰胺酶(MBL)酶在很大程度上导致了这种耐药性。最近发现的新德里金属β-内酰胺酶1(NDM-1)是该家族的一个新成员,能够水解多种临床上重要的抗生素。本文报道了肺炎克雷伯菌中NDM-1的晶体结构,并结合最近存入的其他NDM-1坐标讨论了其结构和活性位点。

相似文献

1
Structure of New Delhi metallo-β-lactamase 1 (NDM-1).
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2011 Oct 1;67(Pt 10):1160-4. doi: 10.1107/S1744309111029654. Epub 2011 Sep 6.
2
Crystal structure of New Delhi metallo-β-lactamase reveals molecular basis for antibiotic resistance.
Protein Sci. 2011 Sep;20(9):1484-91. doi: 10.1002/pro.697. Epub 2011 Aug 2.
4
Characterization of purified New Delhi metallo-β-lactamase-1.
Biochemistry. 2011 Nov 22;50(46):10102-13. doi: 10.1021/bi201449r. Epub 2011 Nov 1.
5
New Delhi metallo-β-lactamase: structural insights into β-lactam recognition and inhibition.
J Am Chem Soc. 2012 Jul 18;134(28):11362-5. doi: 10.1021/ja303579d. Epub 2012 Jul 5.
6
Emergence of New Delhi Metallo-β-Lactamase (NDM-5) in from Neonates in a Nigerian Hospital.
mSphere. 2019 Mar 13;4(2):e00685-18. doi: 10.1128/mSphere.00685-18.
8
A Lysine-Targeted Affinity Label for Serine-β-Lactamase Also Covalently Modifies New Delhi Metallo-β-lactamase-1 (NDM-1).
Biochemistry. 2019 Jun 25;58(25):2834-2843. doi: 10.1021/acs.biochem.9b00393. Epub 2019 Jun 7.
10
A close look onto structural models and primary ligands of metallo-β-lactamases.
Drug Resist Updat. 2018 Sep;40:1-12. doi: 10.1016/j.drup.2018.08.001. Epub 2018 Aug 25.

引用本文的文献

1
Crystal structure reveals the hydrophilic R1 group impairs NDM-1-ligand binding via water penetration at L3.
J Struct Biol X. 2025 Jul 1;12:100133. doi: 10.1016/j.yjsbx.2025.100133. eCollection 2025 Dec.
2
Fluorescently Modified NDM-1: A Versatile Drug Sensor for Rapid β-Lactam Antibiotic and Inhibitor Screening.
ACS Omega. 2024 Feb 13;9(8):9161-9169. doi: 10.1021/acsomega.3c08117. eCollection 2024 Feb 27.
3
Prediction of Phytochemicals for Their Potential to Inhibit New Delhi Metallo β-Lactamase (NDM-1).
Pharmaceuticals (Basel). 2023 Oct 3;16(10):1404. doi: 10.3390/ph16101404.
4
Preparation and evaluation of the exotoxin A nano-gold conjugate as a vaccine candidate for infections.
Iran J Basic Med Sci. 2021 Oct;24(10):1366-1372. doi: 10.22038/IJBMS.2021.58367.12960.
5
Enzyme Inhibitors: The Best Strategy to Tackle Superbug NDM-1 and Its Variants.
Int J Mol Sci. 2021 Dec 24;23(1):197. doi: 10.3390/ijms23010197.
7
Emergence of Hybrid Resistance and Virulence Plasmids Harboring New Delhi Metallo-β-Lactamase in in Russia.
Antibiotics (Basel). 2021 Jun 9;10(6):691. doi: 10.3390/antibiotics10060691.
8
9
Mechanistic Investigations of Metallo-β-lactamase Inhibitors: Strong Zinc Binding Is Not Required for Potent Enzyme Inhibition*.
ChemMedChem. 2021 May 18;16(10):1651-1659. doi: 10.1002/cmdc.202100042. Epub 2021 Mar 3.
10
Molecular Bases of the Membrane Association Mechanism Potentiating Antibiotic Resistance by New Delhi Metallo-β-lactamase 1.
ACS Infect Dis. 2020 Oct 9;6(10):2719-2731. doi: 10.1021/acsinfecdis.0c00341. Epub 2020 Sep 14.

本文引用的文献

1
A structural view of the antibiotic degradation enzyme NDM-1 from a superbug.
Protein Cell. 2011 May;2(5):384-94. doi: 10.1007/s13238-011-1055-9. Epub 2011 Jun 2.
2
Crystal structure of NDM-1 reveals a common β-lactam hydrolysis mechanism.
FASEB J. 2011 Aug;25(8):2574-82. doi: 10.1096/fj.11-184036. Epub 2011 Apr 20.
3
REFMAC5 for the refinement of macromolecular crystal structures.
Acta Crystallogr D Biol Crystallogr. 2011 Apr;67(Pt 4):355-67. doi: 10.1107/S0907444911001314. Epub 2011 Mar 18.
4
Biochemical and structural characterization of the subclass B1 metallo-β-lactamase VIM-4.
Antimicrob Agents Chemother. 2011 Mar;55(3):1248-55. doi: 10.1128/AAC.01486-09. Epub 2010 Dec 13.
5
Features and development of Coot.
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501. doi: 10.1107/S0907444910007493. Epub 2010 Mar 24.
6
Three decades of beta-lactamase inhibitors.
Clin Microbiol Rev. 2010 Jan;23(1):160-201. doi: 10.1128/CMR.00037-09.
8
Motion of the zinc ions in catalysis by a dizinc metallo-beta-lactamase.
J Am Chem Soc. 2009 Aug 26;131(33):11642-3. doi: 10.1021/ja902534b.
9
Phaser crystallographic software.
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674. doi: 10.1107/S0021889807021206. Epub 2007 Jul 13.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验