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细菌核糖体需要多个 L12 二聚体来有效启动和延长涉及 IF2 和 EF-G 的蛋白质合成。

Bacterial ribosome requires multiple L12 dimers for efficient initiation and elongation of protein synthesis involving IF2 and EF-G.

机构信息

Department of Cell and Molecular Biology, Uppsala University, BMC, Box-596, SE-751 24 Uppsala, Sweden.

出版信息

Nucleic Acids Res. 2012 Mar;40(5):2054-64. doi: 10.1093/nar/gkr1031. Epub 2011 Nov 18.

Abstract

The ribosomal stalk in bacteria is composed of four or six copies of L12 proteins arranged in dimers that bind to the adjacent sites on protein L10, spanning 10 amino acids each from the L10 C-terminus. To study why multiple L12 dimers are required on the ribosome, we created a chromosomally engineered Escherichia coli strain, JE105, in which the peripheral L12 dimer binding site was deleted. Thus JE105 harbors ribosomes with only a single L12 dimer. Compared to MG1655, the parental strain with two L12 dimers, JE105 showed significant growth defect suggesting suboptimal function of the ribosomes with one L12 dimer. When tested in a cell-free reconstituted transcription-translation assay the synthesis of a full-length protein, firefly luciferase, was notably slower with JE105 70S ribosomes and 50S subunits. Further, in vitro analysis by fast kinetics revealed that single L12 dimer ribosomes from JE105 are defective in two major steps of translation, namely initiation and elongation involving translational GTPases IF2 and EF-G. Varying number of L12 dimers on the ribosome can be a mechanism in bacteria for modulating the rate of translation in response to growth condition.

摘要

细菌的核糖体柄由四个或六个 L12 蛋白组成,这些蛋白以二聚体的形式排列,与 L10 蛋白的相邻位点结合,每个 L10 蛋白的 C 端跨越 10 个氨基酸。为了研究核糖体上为什么需要多个 L12 二聚体,我们构建了一个染色体工程大肠杆菌菌株 JE105,其中删除了外周 L12 二聚体结合位点。因此,JE105 拥有的核糖体只有一个 L12 二聚体。与具有两个 L12 二聚体的亲本菌株 MG1655 相比,JE105 表现出明显的生长缺陷,这表明一个 L12 二聚体的核糖体功能不佳。在体外无细胞转录-翻译重建测定中,用 JE105 70S 核糖体和 50S 亚基合成全长萤火虫荧光素酶的速度明显较慢。此外,通过快速动力学的体外分析表明,来自 JE105 的单个 L12 二聚体核糖体在翻译的两个主要步骤(即涉及翻译 GTP 酶 IF2 和 EF-G 的起始和延伸)中存在缺陷。核糖体上 L12 二聚体数量的变化可能是细菌调节翻译速度以响应生长条件的一种机制。

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