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Arp2 亚基的磷酸化解除了 Arp2/3 复合物激活的自动抑制相互作用。

Phosphorylation of the Arp2 subunit relieves auto-inhibitory interactions for Arp2/3 complex activation.

机构信息

Graduate Group in Biophysics, University of California, San Francisco, San Francisco, California, USA.

出版信息

PLoS Comput Biol. 2011 Nov;7(11):e1002226. doi: 10.1371/journal.pcbi.1002226. Epub 2011 Nov 10.

DOI:10.1371/journal.pcbi.1002226
PMID:22125478
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3220268/
Abstract

Actin filament assembly by the actin-related protein (Arp) 2/3 complex is necessary to build many cellular structures, including lamellipodia at the leading edge of motile cells and phagocytic cups, and to move endosomes and intracellular pathogens. The crucial role of the Arp2/3 complex in cellular processes requires precise spatiotemporal regulation of its activity. While binding of nucleation-promoting factors (NPFs) has long been considered essential to Arp2/3 complex activity, we recently showed that phosphorylation of the Arp2 subunit is also necessary for Arp2/3 complex activation. Using molecular dynamics simulations and biochemical assays with recombinant Arp2/3 complex, we now show how phosphorylation of Arp2 induces conformational changes permitting activation. The simulations suggest that phosphorylation causes reorientation of Arp2 relative to Arp3 by destabilizing a network of salt-bridge interactions at the interface of the Arp2, Arp3, and ARPC4 subunits. Simulations also suggest a gain-of-function ARPC4 mutant that we show experimentally to have substantial activity in the absence of NPFs. We propose a model in which a network of auto-inhibitory salt-bridge interactions holds the Arp2 subunit in an inactive orientation. These auto-inhibitory interactions are destabilized upon phosphorylation of Arp2, allowing Arp2 to reorient to an activation-competent state.

摘要

肌动蛋白相关蛋白 (Arp) 2/3 复合物介导的肌动蛋白丝组装对于构建许多细胞结构是必需的,包括运动细胞前缘的片状伪足和吞噬小窝,以及移动内体和细胞内病原体。Arp2/3 复合物在细胞过程中的关键作用需要其活性的精确时空调节。虽然核化促进因子 (NPF) 的结合长期以来被认为对 Arp2/3 复合物活性至关重要,但我们最近表明,Arp2 亚基的磷酸化对于 Arp2/3 复合物的激活也是必需的。使用重组 Arp2/3 复合物的分子动力学模拟和生化测定,我们现在展示了 Arp2 的磷酸化如何诱导构象变化以允许激活。模拟表明,磷酸化通过破坏 Arp2、Arp3 和 ARPC4 亚基界面上盐桥相互作用的网络,导致 Arp2 相对于 Arp3 的重新定向。模拟还表明存在一种具有功能获得的 ARPC4 突变体,我们通过实验表明其在没有 NPF 的情况下具有实质性的活性。我们提出了一个模型,其中一个自动抑制盐桥相互作用的网络将 Arp2 亚基保持在非活性取向。这些自动抑制相互作用在 Arp2 磷酸化时被破坏,允许 Arp2 重新定向到激活能力状态。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/c0391eccba8a/pcbi.1002226.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/58e23c77f5eb/pcbi.1002226.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/95b2918dec34/pcbi.1002226.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/6e3b429fdb59/pcbi.1002226.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/bf9bf8453ef0/pcbi.1002226.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/44ac4c2c932f/pcbi.1002226.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/c1450207aed5/pcbi.1002226.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/c0391eccba8a/pcbi.1002226.g007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/58e23c77f5eb/pcbi.1002226.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/95b2918dec34/pcbi.1002226.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/6e3b429fdb59/pcbi.1002226.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/bf9bf8453ef0/pcbi.1002226.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/44ac4c2c932f/pcbi.1002226.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/c1450207aed5/pcbi.1002226.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1869/3220268/c0391eccba8a/pcbi.1002226.g007.jpg

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3
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