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利用 CalMorph 形态成像程序分析新型 24 元大环内酯 JBIR-19 在酿酒酵母中的生物学活性。

Analysis of the biological activity of a novel 24-membered macrolide JBIR-19 in Saccharomyces cerevisiae by the morphological imaging program CalMorph.

机构信息

Department of Integrated Biosciences, Graduate School of Frontier Sciences, University of Tokyo, Kashiwa, Chiba, Japan.

出版信息

FEMS Yeast Res. 2012 May;12(3):293-304. doi: 10.1111/j.1567-1364.2011.00770.x. Epub 2012 Jan 3.

Abstract

To investigate the biological activity of a novel 24-membered macrolide compound, JBIR-19, isolated from the culture broth of the entomopathogenic fungus Metarhizium sp. fE61, morphological changes in yeast cells were examined using the automated image-processing program CalMorph. Principal components analysis was used to elucidate dynamic changes in the phenotypes, revealing two independent effects of JBIR-19 in yeast cells: bud elongation and increased size of the actin region. Using a fitness assay, we identified the genes required for robust growth in the presence of JBIR-19. Among these were CCW12, YLR111W, and DHH1, which are also involved in abnormal bud morphology. Based on these results and others, we predict intracellular targets of JBIR-19 and its functional interactions.

摘要

为了研究从昆虫病原真菌 Metarhizium sp. fE61 的发酵液中分离得到的新型 24 元大环内酯化合物 JBIR-19 的生物学活性,使用自动图像处理程序 CalMorph 观察酵母细胞的形态变化。主成分分析用于阐明酵母细胞表型的动态变化,揭示 JBIR-19 在酵母细胞中存在两种独立的作用:芽伸长和肌动蛋白区域增大。使用适合度测定,我们确定了在 JBIR-19 存在下稳健生长所需的基因。其中包括 CCW12、YLR111W 和 DHH1,它们也参与异常芽形态的形成。基于这些结果和其他结果,我们预测了 JBIR-19 的细胞内靶标及其功能相互作用。

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