Suppr超能文献

用于基因工程小鼠表型分析的三维成像方式。

3-dimensional imaging modalities for phenotyping genetically engineered mice.

机构信息

Small Animal Imaging Shared Resource, The James Comprehensive Cancer Center Department of Biomedical Informatics, Ohio State University, Columbus, Ohio, USA.

出版信息

Vet Pathol. 2012 Jan;49(1):106-15. doi: 10.1177/0300985811429814. Epub 2011 Dec 6.

Abstract

A variety of 3-dimensional (3D) digital imaging modalities are available for whole-body assessment of genetically engineered mice: magnetic resonance microscopy (MRM), X-ray microcomputed tomography (microCT), optical projection tomography (OPT), episcopic and cryoimaging, and ultrasound biomicroscopy (UBM). Embryo and adult mouse phenotyping can be accomplished at microscopy or near microscopy spatial resolutions using these modalities. MRM and microCT are particularly well-suited for evaluating structural information at the organ level, whereas episcopic and OPT imaging provide structural and functional information from molecular fluorescence imaging at the cellular level. UBM can be used to monitor embryonic development longitudinally in utero. Specimens are not significantly altered during preparation, and structures can be viewed in their native orientations. Technologies for rapid automated data acquisition and high-throughput phenotyping have been developed and continually improve as this exciting field evolves.

摘要

有多种 3 维(3D)数字成像方式可用于对基因工程小鼠进行全身评估:磁共振显微镜(MRM)、X 射线微计算机断层扫描(microCT)、光学投影断层扫描(OPT)、外显和冷冻成像以及超声生物显微镜(UBM)。这些方式可在显微镜或接近显微镜的空间分辨率下完成胚胎和成年小鼠的表型分析。MRM 和 microCT 特别适合评估器官水平的结构信息,而外显和 OPT 成像则可从细胞水平的分子荧光成像提供结构和功能信息。UBM 可用于在子宫内对胚胎发育进行纵向监测。在准备过程中,标本不会发生明显改变,并且可以以其自然方向观察结构。随着这一令人兴奋的领域的发展,已经开发出用于快速自动数据采集和高通量表型分析的技术,并且这些技术在不断改进。

相似文献

1
3-dimensional imaging modalities for phenotyping genetically engineered mice.
Vet Pathol. 2012 Jan;49(1):106-15. doi: 10.1177/0300985811429814. Epub 2011 Dec 6.
2
Imaging modalities to assess structural birth defects in mutant mouse models.
Birth Defects Res C Embryo Today. 2010 Sep;90(3):176-84. doi: 10.1002/bdrc.20187.
3
Embryonic and neonatal phenotyping of genetically engineered mice.
ILAR J. 2006;47(2):103-17. doi: 10.1093/ilar.47.2.103.
4
Label-free optical projection tomography for quantitative three-dimensional anatomy of mouse embryo.
J Biophotonics. 2019 Jul;12(7):e201800481. doi: 10.1002/jbio.201800481. Epub 2019 Apr 29.
5
microMRI-HREM pipeline for high-throughput, high-resolution phenotyping of murine embryos.
J Anat. 2007 Jul;211(1):132-7. doi: 10.1111/j.1469-7580.2007.00746.x. Epub 2007 May 28.
6
A feasibility study of OCT for anatomical and vascular phenotyping of mouse embryo.
J Biophotonics. 2020 May;13(5):e201960225. doi: 10.1002/jbio.201960225. Epub 2020 Mar 1.
7
Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping.
Neuroimage. 2011 Jan 15;54(2):769-78. doi: 10.1016/j.neuroimage.2010.07.039. Epub 2010 Jul 23.
8
Neuroanatomical phenotyping of the mouse brain with three-dimensional autofluorescence imaging.
Physiol Genomics. 2012 Aug 1;44(15):778-85. doi: 10.1152/physiolgenomics.00055.2012. Epub 2012 Jun 19.
9
Rapid high resolution three dimensional reconstruction of embryos with episcopic fluorescence image capture.
Birth Defects Res C Embryo Today. 2004 Sep;72(3):213-23. doi: 10.1002/bdrc.20023.
10
LAMA: automated image analysis for the developmental phenotyping of mouse embryos.
Development. 2021 Mar 24;148(18):dev192955. doi: 10.1242/dev.192955.

引用本文的文献

2
Optimization of Pulmonary Vasculature Tridimensional Phenotyping in The Rat Fetus.
Sci Rep. 2019 Feb 4;9(1):1244. doi: 10.1038/s41598-018-37906-8.
4
Morphometrics, 3D Imaging, and Craniofacial Development.
Curr Top Dev Biol. 2015;115:561-97. doi: 10.1016/bs.ctdb.2015.09.003. Epub 2015 Oct 27.
5
Automatic Stem Cell Detection in Microscopic Whole Mouse Cryo-Imaging.
IEEE Trans Med Imaging. 2016 Mar;35(3):819-29. doi: 10.1109/TMI.2015.2497285. Epub 2015 Nov 2.

本文引用的文献

2
Visualization of color anatomy and molecular fluorescence in whole-mouse cryo-imaging.
Comput Med Imaging Graph. 2011 Apr;35(3):195-205. doi: 10.1016/j.compmedimag.2010.10.003. Epub 2010 Oct 30.
3
Embryonic Wnt gene expression in the nitrofen-induced hypoplastic lung using 3-dimensional imaging.
J Pediatr Surg. 2010 Nov;45(11):2129-35. doi: 10.1016/j.jpedsurg.2010.06.046.
4
Random mutagenesis of the mouse genome: a strategy for discovering gene function and the molecular basis of disease.
Am J Physiol Gastrointest Liver Physiol. 2011 Jan;300(1):G1-11. doi: 10.1152/ajpgi.00343.2010. Epub 2010 Oct 14.
5
Removal of subsurface fluorescence in cryo-imaging using deconvolution.
Opt Express. 2010 Oct 11;18(21):22324-38. doi: 10.1364/OE.18.022324.
7
Training pathologists in mouse pathology.
Vet Pathol. 2012 Mar;49(2):393-7. doi: 10.1177/0300985810381244. Epub 2010 Sep 3.
8
Mouse embryonic phenotyping by morphometric analysis of MR images.
Physiol Genomics. 2010 Oct;42A(2):89-95. doi: 10.1152/physiolgenomics.00091.2010. Epub 2010 Aug 3.
9
Magnetic resonance virtual histology for embryos: 3D atlases for automated high-throughput phenotyping.
Neuroimage. 2011 Jan 15;54(2):769-78. doi: 10.1016/j.neuroimage.2010.07.039. Epub 2010 Jul 23.
10
Down's syndrome-like cardiac developmental defects in embryos of the transchromosomic Tc1 mouse.
Cardiovasc Res. 2010 Nov 1;88(2):287-95. doi: 10.1093/cvr/cvq193. Epub 2010 Jun 16.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验