Department of Protein Biochemistry and Proteomics, Centre of the Region Haná for Biotechnological and Agricultural Research, Faculty of Science, Palacký University, Šlechtitelů 11, Olomouc, Czech Republic.
Amino Acids. 2012 Sep;43(3):1189-202. doi: 10.1007/s00726-011-1174-x. Epub 2011 Dec 13.
The metabolic degradation of aldehydes is catalyzed by oxidoreductases from which aldehyde dehydrogenases (EC 1.2.1) comprise nonspecific or substrate-specific enzymes. The latter subset is represented, e.g., by NAD(+)-dependent aminoaldehyde dehydrogenases (AMADHs; EC 1.2.1.19) oxidizing a group of naturally occurring ω-aminoaldehydes including polyamine oxidation products. Recombinant isoenzymes from pea (PsAMADH1 and 2) and tomato (LeAMADH1 and 2) were subjected to kinetic measurements with synthetic aldehydes containing a nitrogenous heterocycle such as pyridinecarbaldehydes and their halogenated derivatives, (pyridinylmethylamino)-aldehydes, pyridinyl propanals and aldehydes derived from purine, 7-deazapurine and pyrimidine to characterize their substrate specificity and significance of the resulting data for in vivo reactions. The enzymatic production of the corresponding carboxylic acids was analyzed by liquid chromatography coupled to electrospray ionization mass spectrometry. Although the studied AMADHs are largely homologous and supposed to have a very similar active site architecture, significant differences were observed. LeAMADH1 displayed the broadest specificity oxidizing almost all compounds followed by PsAMADH2 and 1. In contrast, LeAMADH2 accepted only a few compounds as substrates. Pyridinyl propanals were converted by all isoenzymes, usually better than pyridinecarbaldehydes and aldehydes with fused rings. The K (m) values for the best substrates were in the range of 10(-5)-10(-4) M. Nevertheless, the catalytic efficiency values (V (max)/K (m)) reached only a very small fraction of that with 3-aminopropanal (except for LeAMADH1 activity with two pyridine-derived compounds). Docking experiments using the crystal structure of PsAMADH2 were involved to discuss differences in results with position isomers or alkyl chain homologs.
醛的代谢降解由氧化还原酶催化,其中醛脱氢酶(EC 1.2.1)包括非特异性或底物特异性酶。后者亚类例如由 NAD(+)依赖的氨基酸醛脱氢酶(AMADHs;EC 1.2.1.19)氧化一组天然存在的ω-氨基酸醛,包括多胺氧化产物。来自豌豆(PsAMADH1 和 2)和番茄(LeAMADH1 和 2)的重组同工酶进行了动力学测量,使用含有含氮杂环如吡啶甲醛和其卤代衍生物、(吡啶基甲基氨基)-醛、吡啶基丙醛和嘌呤、7-脱氮嘌呤和嘧啶衍生的醛的合成醛作为底物,以表征它们的底物特异性和所得数据对体内反应的意义。通过液相色谱-电喷雾电离质谱联用分析相应羧酸的酶促生成。尽管研究的 AMADHs 高度同源,并且假定具有非常相似的活性位点结构,但观察到了显著的差异。LeAMADH1 表现出最广泛的特异性,氧化几乎所有的化合物,其次是 PsAMADH2 和 1。相比之下,LeAMADH2 仅接受少数化合物作为底物。吡啶基丙醛被所有同工酶转化,通常比吡啶甲醛和带有稠合环的醛更好。最佳底物的 K (m) 值在 10(-5)-10(-4) M 范围内。然而,催化效率值(V (max)/K (m))仅达到 3-氨基丙醛的一小部分(除了 LeAMADH1 对两种来自吡啶的化合物的活性)。使用 PsAMADH2 的晶体结构进行对接实验,以讨论位置异构体或烷基链同系物的结果差异。