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本文引用的文献

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Microfluidics for synthetic biology: from design to execution.用于合成生物学的微流体技术:从设计到执行
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Growth landscape formed by perception and import of glucose in yeast.酵母中葡萄糖的感知和摄取所形成的生长景观。
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Microfluidic devices for measuring gene network dynamics in single cells.用于测量单细胞基因网络动态的微流控装置。
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Metabolic gene regulation in a dynamically changing environment.动态变化环境中的代谢基因调控
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Positive feedback of G1 cyclins ensures coherent cell cycle entry.G1 期细胞周期蛋白的正反馈确保细胞周期的协调进入。
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A yeast catabolic enzyme controls transcriptional memory.一种酵母分解代谢酶控制转录记忆。
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Genomics and gene transcription kinetics in yeast.酵母中的基因组学与基因转录动力学
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9
Transcriptional response of steady-state yeast cultures to transient perturbations in carbon source.稳态酵母培养物对碳源瞬态扰动的转录反应。
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Multiple transcripts regulate glucose-triggered mRNA decay of the lactate transporter JEN1 from Saccharomyces cerevisiae.多个转录本调控酿酒酵母中乳酸转运蛋白JEN1的葡萄糖触发的mRNA衰变。
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拮抗基因转录本调控对新生长环境的适应。

Antagonistic gene transcripts regulate adaptation to new growth environments.

机构信息

Department of Bioengineering, University of California at San Diego, La Jolla, CA 92093, USA.

出版信息

Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21087-92. doi: 10.1073/pnas.1111408109. Epub 2011 Dec 12.

DOI:10.1073/pnas.1111408109
PMID:22160690
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3248483/
Abstract

Cells have evolved complex regulatory networks that reorganize gene expression patterns in response to changing environmental conditions. These changes often involve redundant mechanisms that affect various levels of gene expression. Here, we examine the consequences of enhanced mRNA degradation in the galactose utilization network of Saccharomyces cerevisiae. We observe that glucose-induced degradation of GAL1 transcripts provides a transient growth advantage to cells upon addition of glucose. We show that the advantage arises from relief of translational competition between GAL1 transcripts and those of cyclin CLN3, a translationally regulated initiator of cell division. This competition creates a translational bottleneck that balances the production of Gal1p and Cln3p and represents a posttranscriptional control mechanism that enhances the cell's ability to adapt to changes in carbon source. We present evidence that the spatial regulation of GAL1 and CLN3 transcripts is what allows growth to be maintained during fluctuations of glucose availability. Our results provide unique insights into how cells optimize energy use during growth in a dynamic environment.

摘要

细胞已经进化出复杂的调控网络,以响应环境条件的变化重新组织基因表达模式。这些变化通常涉及影响各种基因表达水平的冗余机制。在这里,我们研究了增强酿酒酵母半乳糖利用网络中 mRNA 降解对细胞的影响。我们观察到,在添加葡萄糖时,葡萄糖诱导的 GAL1 转录本降解为细胞提供了短暂的生长优势。我们表明,这种优势源于 GAL1 转录本和细胞周期蛋白 CLN3 转录本之间的翻译竞争的缓解,CLN3 是细胞分裂的翻译调节起始因子。这种竞争形成了一个翻译瓶颈,平衡了 Gal1p 和 Cln3p 的产生,代表了一种转录后控制机制,增强了细胞适应碳源变化的能力。我们提出的证据表明,GAL1 和 CLN3 转录本的空间调节使得在葡萄糖供应波动期间能够维持生长。我们的研究结果为细胞如何在动态环境中优化生长过程中的能量利用提供了独特的见解。