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幽门螺旋杆菌铁尿素酶的载脂蛋白分离与激活,以及振动结构。

Apoprotein isolation and activation, and vibrational structure of the Helicobacter mustelae iron urease.

机构信息

Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA.

出版信息

J Inorg Biochem. 2012 Jun;111:195-202. doi: 10.1016/j.jinorgbio.2011.10.016. Epub 2011 Nov 28.

DOI:10.1016/j.jinorgbio.2011.10.016
PMID:22196017
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC3314087/
Abstract

The micro aerophilic pathogen Helicobacter mustelae synthesizes an oxygen-labile, iron-containing urease (UreA2B2) in addition to its standard nickel-containing enzyme (UreAB). An apoprotein form of the iron urease was prepared from ureA2B2-expressing recombinant Escherichia coli cells that were grown in minimal medium. Temperature-dependent circular dichroism measurements of holoprotein and apoprotein demonstrate an enhancement of thermal stability associated with the UreA2B2 metallocenter. In parallel to the situation reported for nickel activation of the standard urease apoprotein, incubation of UreA2B2 apoprotein with ferrous ions and bicarbonate generated urease activity in a portion of the nascent active sites. In addition, ferrous ions were shown to be capable of reductively activating the oxidized metallocenter. Resonance Raman spectra of the inactive, aerobically-purified UreA2B2 holoprotein exhibit vibrations at 495cm(-1) and 784cm(-1), consistent with ν(s) and ν(as) modes of an Fe(III)OFe(III) center; these modes undergo downshifts upon binding of urea and were unaffected by changes in pH. The low-frequency mode also exhibits an isotopic shift from 497 to 476cm(-1) upon (16)O/(18)O bulk water isotope substitution. Expression of subunits of the conventional nickel-containing Klebsiella aerogenes urease in cells grown in rich medium without nickel resulted in iron incorporation into a portion of the protein. The inactive iron-loaded species exhibited a UV-visible spectrum similar to oxidized UreA2B2 and was capable of being reductively activated under anoxic conditions. Results from these studies more clearly define the formation and unique properties of the iron urease metallocenter.

摘要

微需氧病原体幽门螺旋杆菌除了其标准的含镍酶(UreAB)外,还合成一种氧敏性含铁的脲酶(UreA2B2)。从在基本培养基中生长的表达 ureA2B2 的重组大肠杆菌细胞中制备含铁脲酶的脱辅基蛋白形式。全蛋白和脱辅基蛋白的温度依赖性圆二色性测量表明,与 UreA2B2 金属中心相关的热稳定性增强。与报道的镍对标准脲酶脱辅基蛋白的激活情况类似,亚铁离子和碳酸氢盐孵育 UreA2B2 脱辅基蛋白可在部分新生活性位点中产生脲酶活性。此外,亚铁离子被证明能够还原激活氧化的金属中心。在有氧条件下纯化的非活性 UreA2B2 全蛋白的共振拉曼光谱显示,在 495cm(-1)和 784cm(-1)处存在振动,与 Fe(III)OFe(III)中心的 ν(s)和 ν(as)模式一致;这些模式在与尿素结合时发生位移,并且不受 pH 值变化的影响。低频模式在(16)O/(18)O 体相同位素取代时也从 497 位移至 476cm(-1)。在不含镍的富培养基中生长的细胞中表达传统的含镍肺炎克雷伯氏菌脲酶亚基导致部分蛋白质掺入铁。无活性的铁负载物种表现出与氧化的 UreA2B2 相似的紫外-可见光谱,并且能够在缺氧条件下被还原激活。这些研究的结果更清楚地定义了铁脲酶金属中心的形成和独特性质。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/f2c807d6e2b3/nihms341376f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/9514137fdcad/nihms341376f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/962b8c50b708/nihms341376f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/4310033a4d7b/nihms341376f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/f2c807d6e2b3/nihms341376f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/9514137fdcad/nihms341376f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/962b8c50b708/nihms341376f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/4310033a4d7b/nihms341376f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ef6a/3314087/f2c807d6e2b3/nihms341376f4.jpg

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本文引用的文献

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Proc Natl Acad Sci U S A. 2011 Aug 9;108(32):13095-9. doi: 10.1073/pnas.1106915108. Epub 2011 Jul 25.
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Chemistry of Ni2+ in urease: sensing, trafficking, and catalysis.镍离子在脲酶中的化学:感应、运输和催化。
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Urea metabolism in plants.植物中的尿素代谢。
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Bacterial urease and its role in long-lasting human diseases.细菌脲酶及其在持久人类疾病中的作用。
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