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西半球普通蟾蜍(Bufo bufo 种复合体)的分子系统发育和历史生物地理学。

Molecular phylogenetics and historical biogeography of the west-palearctic common toads (Bufo bufo species complex).

机构信息

Institute of Evolutionary Biology (CSIC-UPF), Passeig Marítim de la Barceloneta, 37-49, 08003 Barcelona, Spain.

出版信息

Mol Phylogenet Evol. 2012 Apr;63(1):113-30. doi: 10.1016/j.ympev.2011.12.019. Epub 2011 Dec 30.

DOI:10.1016/j.ympev.2011.12.019
PMID:22214922
Abstract

In most pan-Eurasiatic species complexes, two phenomena have been traditionally considered key processes of their cladogenesis and biogeography. First, it is hypothesized that the origin and development of the Central Asian Deserts generated a biogeographic barrier that fragmented past continuous distributions in Eastern and Western domains. Second, Pleistocene glaciations have been proposed as the main process driving the regional diversification within each of these domains. The European common toad and its closest relatives provide an interesting opportunity to examine the relative contributions of these paleogeographic and paleoclimatic events to the phylogeny and biogeography of a widespread Eurasiatic group. We investigate this issue by applying a multiproxy approach combining information from molecular phylogenies, a multiple correspondence analysis of allozyme data and species distribution models. Our study includes 304 specimens from 164 populations, covering most of the distributional range of the Bufo bufo species complex in the Western Palearctic. The phylogenies (ML and Bayesian analyses) were based on a total of 1988 bp of mitochondrial DNA encompassing three genes (tRNAval, 16S and ND1). A dataset with 173 species of the family Bufonidae was assembled to estimate the separation of the two pan-Eurasiatic species complexes of Bufo and to date the main biogeographic events within the Bufo bufo species complex. The allozyme study included sixteen protein systems, corresponding to 21 presumptive loci. Finally, the distribution models were based on maximum entropy. Our distribution models show that Eastern and Western species complexes are greatly isolated by the Central Asian Deserts, and our dating estimates place this divergence during the Middle Miocene, a moment in which different sources of evidence document a major upturn of the aridification rate of Central Asia. This climate-driven process likely separated the Eastern and Western species. At the level of the Western Palearctic, our dating estimates place most of the deepest phylogenetic structure before the Pleistocene, indicating that Pleistocene glaciations did not have a major role in splitting the major lineages. At a shallow level, the glacial dynamics contributed unevenly to the genetic structuring of populations, with a strong influence in the European-Caucasian populations, and a more relaxed effect in the Iberian populations.

摘要

在大多数泛欧亚物种复合体中,传统上认为有两个现象是它们系统发育和生物地理学的关键过程。首先,人们假设中亚荒漠的起源和发展形成了一个生物地理屏障,使过去在东部和西部区域的连续分布发生了断裂。其次,有人提出更新世冰川作用是驱动这些区域内的种内多样化的主要过程。欧洲蟾蜍及其最亲近的亲属为研究这些古地理和古气候事件对广泛分布的欧亚类群的系统发育和生物地理学的相对贡献提供了一个有趣的机会。我们通过应用一种多代理方法来研究这个问题,该方法结合了分子系统发育学、同工酶数据的多元对应分析和物种分布模型的信息。我们的研究包括来自 164 个种群的 304 个标本,涵盖了欧洲蟾蜍种复合体在西古北区的大部分分布范围。系统发育树(最大似然法和贝叶斯分析)基于总共 1988bp 的线粒体 DNA,包括三个基因(tRNAval、16S 和 ND1)。我们组装了一个包含 173 种蟾蜍科物种的数据集,以估计两个泛欧亚的蟾蜍和蟾蜍种复合体之间的分离,并确定蟾蜍种复合体内部的主要生物地理事件的时间。同工酶研究包括 16 个蛋白系统,对应于 21 个假定的基因座。最后,分布模型基于最大熵。我们的分布模型表明,东部和西部的物种复合体被中亚荒漠极大地隔离,我们的年代估计表明,这种分歧发生在中中新世,此时不同的证据来源记录了中亚干旱化速度的大幅上升。这个气候驱动的过程可能使东部和西部的物种分离。在西古北区,我们的年代估计表明,大部分最深刻的系统发育结构发生在更新世之前,这表明更新世冰川作用并没有在分裂主要谱系方面发挥主要作用。在浅层水平上,冰川动力学对种群的遗传结构产生了不均匀的影响,在欧洲-高加索种群中有强烈的影响,而在伊比利亚种群中的影响则更为宽松。

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