Department of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Pretoria, South Africa.
PLoS One. 2011;6(12):e28545. doi: 10.1371/journal.pone.0028545. Epub 2011 Dec 28.
The global movement and speciation of fungal plant pathogens is important, especially because of the economic losses they cause and the ease with which they are able to spread across large areas. Understanding the biogeography and origin of these plant pathogens can provide insights regarding their dispersal and current day distribution. We tested the hypothesis of a Gondwanan origin of the plant pathogenic mushroom genus Armillaria and the currently accepted premise that vicariance accounts for the extant distribution of the species.
The phylogeny of a selection of Armillaria species was reconstructed based on Maximum Parsimony (MP), Maximum Likelihood (ML) and Bayesian Inference (BI). A timeline was then placed on the divergence of lineages using a Bayesian relaxed molecular clock approach.
Phylogenetic analyses of sequenced data for three combined nuclear regions provided strong support for three major geographically defined clades: Holarctic, South American-Australasian and African. Molecular dating placed the initial radiation of the genus at 54 million years ago within the Early Paleogene, postdating the tectonic break-up of Gondwana.
The distribution of extant Armillaria species is the result of ancient long-distance dispersal rather than vicariance due to continental drift. As these finding are contrary to most prior vicariance hypotheses for fungi, our results highlight the important role of long-distance dispersal in the radiation of fungal pathogens from the Southern Hemisphere.
真菌植物病原体的全球迁移和物种形成非常重要,尤其是因为它们会造成经济损失,而且很容易在大片区域内传播。了解这些植物病原体的生物地理学和起源可以深入了解它们的扩散和当前的分布情况。我们检验了真菌属 Armillaria 源自冈瓦纳大陆的假说,以及目前公认的隔离是造成现存物种分布的前提。
基于最大简约法(MP)、最大似然法(ML)和贝叶斯推断(BI),对选定的 Armillaria 物种的系统发育进行了重建。然后,使用贝叶斯放松分子钟方法,在谱系分歧上放置了一个时间线。
对三个联合核区测序数据的系统发育分析为三大地理定义的分支提供了强有力的支持:全北极、南美-澳大拉西亚和非洲。分子年代测定表明,该属的最初辐射发生在 5400 万年前的古近纪早期,晚于冈瓦纳大陆的构造分裂。
现存 Armillaria 物种的分布是古老长距离扩散的结果,而不是由于大陆漂移导致的隔离。由于这些发现与大多数先前关于真菌的隔离假说相矛盾,因此我们的研究结果强调了长距离扩散在南半球真菌病原体辐射中的重要作用。