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转录组学揭示了该蘑菇对蘑菇属物种的假定菌寄生策略。

Transcriptomics Reveals the Putative Mycoparasitic Strategy of the Mushroom on Species of the Mushroom Genus .

作者信息

Koch Rachel A, Herr Joshua R

机构信息

Department of Plant Pathology, University of Nebraska, Lincoln, Nebraska, USA.

Center for Plant Science Innovation, University of Nebraska, Lincoln, Nebraska, USA.

出版信息

mSystems. 2021 Oct 26;6(5):e0054421. doi: 10.1128/mSystems.00544-21. Epub 2021 Oct 12.

Abstract

During mycoparasitism, a fungus-the host-is parasitized by another fungus-the mycoparasite. The genetic underpinnings of these relationships have been best characterized in ascomycete fungi. However, within basidiomycete fungi, there are rare instances of mushroom-forming species parasitizing the reproductive structures, or sporocarps, of other mushroom-forming species, which have been rarely investigated on a genetic level. One of the most enigmatic of these occurs between Entoloma abortivum and species of , where hyphae of are hypothesized to disrupt the development of sporocarps, resulting in the formation of carpophoroids. However, it remains unknown whether carpophoroids are the direct result of a mycoparasitic relationship. To address the nature of this unique interaction, we analyzed gene expression of field-collected and sporocarps and carpophoroids. Transcripts in the carpophoroids are primarily from , supporting the hypothesis that this species is parasitizing . Most notably, we identified differentially upregulated β-trefoil-type lectins in the carpophoroid, which we hypothesize bind to cell wall galactomannoproteins, thereby mediating recognition between the mycoparasite and the host. The most differentially upregulated transcripts in the carpophoroid code for oxalate decarboxylases-enzymes that degrade oxalic acid. Oxalic acid is a virulence factor in many plant pathogens, including species; however, has evolved a sophisticated strategy to overcome this defense mechanism. The number of gene models and genes that code for carbohydrate-active enzymes in the transcriptome was reduced compared to other closely related species, perhaps as a result of the specialized nature of this interaction. By studying fungi that parasitize other fungi, we can understand the basic biology of these unique interactions. Studies focused on the genetic mechanisms regulating mycoparasitism between host and parasite have thus far concentrated on a single fungal lineage within the Ascomycota. The work presented here expands our understanding of mycoparasitic relationships to the Basidiomycota and represents the first transcriptomic study to our knowledge that examines fungal-fungal relationships in their natural setting. The results presented here suggest that even distantly related mycoparasites utilize similar mechanisms to parasitize their host. Given that species of the mushroom-forming pathogen cause plant root-rot diseases in many agroecosystems, an enhanced understanding of this interaction may contribute to better control of these diseases through biocontrol applications.

摘要

在真菌寄生过程中,一种真菌(宿主)被另一种真菌(真菌寄生物)寄生。这些关系的遗传基础在子囊菌中得到了最好的表征。然而,在担子菌中,有罕见的形成蘑菇的物种寄生其他形成蘑菇的物种的生殖结构或子实体的情况,而在遗传层面上对此很少进行研究。其中最神秘的一种情况发生在流产粉褶菌(Entoloma abortivum)和[未提及的物种名称]之间,据推测[未提及的物种名称]的菌丝会破坏[Entoloma abortivum]子实体的发育,导致类子实体的形成。然而,类子实体是否是真菌寄生关系的直接结果仍不清楚。为了探究这种独特相互作用的本质,我们分析了从野外采集的[Entoloma abortivum]和[未提及的物种名称]的子实体及类子实体的基因表达。类子实体中的转录本主要来自[Entoloma abortivum],这支持了该物种正在寄生[未提及的物种名称]的假设。最值得注意的是,我们在类子实体中鉴定出差异上调的β - 三叶型凝集素,我们推测这些凝集素与[未提及的物种名称]细胞壁半乳甘露聚糖蛋白结合,从而介导真菌寄生物与宿主之间的识别。类子实体中差异上调最明显的[未提及的物种名称]转录本编码草酸脱羧酶,草酸脱羧酶是降解草酸的酶。草酸是包括[未提及的物种名称]在内的许多植物病原体中的一种致病因子;然而,[Entoloma abortivum]已经进化出一种复杂的策略来克服这种防御机制。与其他密切相关的物种相比,[Entoloma abortivum]转录组中编码碳水化合物活性酶的基因模型和基因数量减少了,这可能是由于这种相互作用的特殊性所致。通过研究寄生其他真菌的真菌,我们可以了解这些独特相互作用的基本生物学特性。迄今为止,专注于调节宿主与寄生物之间真菌寄生的遗传机制的研究主要集中在子囊菌门内的单一真菌谱系上。本文所呈现的工作将我们对真菌寄生关系的理解扩展到了担子菌门,并且据我们所知,这是第一项在自然环境中研究真菌 - 真菌关系的转录组学研究。这里呈现的结果表明,即使是亲缘关系较远的真菌寄生物也利用相似的机制寄生其宿主。鉴于形成蘑菇的病原体[未提及的物种名称]在许多农业生态系统中会引发植物根腐病,对这种相互作用的深入理解可能有助于通过生物防治应用更好地控制这些疾病。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ddb/8510539/1344df23ab1c/msystems.00544-21-f001.jpg

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