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剪切和拉伸诱导 P-选择素/PSGL-1 复合物解离的分子动力学模拟。

Molecular dynamics simulation of shear- and stretch-induced dissociation of P-selectin/PSGL-1 complex.

机构信息

Key Laboratory of Microgravity (National Microgravity Laboratory) and Center for Biomechanics and Bioengineering, Institute of Mechanics, Chinese Academy of Sciences, Beijing, People's Republic of China.

出版信息

Biophys J. 2012 Jan 4;102(1):112-20. doi: 10.1016/j.bpj.2011.11.4002. Epub 2012 Jan 3.

Abstract

By mediating the tethering and rolling of leukocytes on vascular surfaces, the interactions between P-selectin and the P-selectin glycoprotein ligand 1 (PSGL-1) play crucial roles during inflammation cascade. Tensile stretch produced by rolling leukocytes and shear stress exerted by blood flow constitute the two types of mechanical forces that act on the P-selectin/PSGL-1 bond. These forces modulate not only dissociation kinetics of this bond, but also the leukocyte adhesion dynamics. However, the respective contribution of the two forces to bond dissociation and to the corresponding microstructural bases remains unclear. To mimic the mechanical microenvironment, we developed two molecular dynamics approaches; namely, an approach involving the shear flow field with a controlled velocity gradient, and the track dragging approach with a defined trajectory. With each approach or with both combined, we investigate the microstructural evolution and dissociation kinetics of the P-LE/SGP-3 construct, which is the smallest functional unit of the P-selectin/PSGL-1 complex. The results demonstrate that both shear flow and tensile stretch play important roles in the collapse of the construct and that, before bond dissociation, the former causes more destruction of domains within the construct than the latter. Dissociation of the P-LE/SGP-3 construct features intramolecular destruction of the epidermal-growth-factor (EGF) domain and the breaking of hydrogen-bond clusters at the P-selectin-lectin/EGF interface. Thus, to better understand how mechanics impacts the dissociation kinetics of the P-selectin/PSGL-1 complex, we propose herein two approaches to mimic its physiological mechanical environment.

摘要

通过介导白细胞在血管表面的固定和滚动,P 选择素与 P 选择素糖蛋白配体 1(PSGL-1)之间的相互作用在炎症级联反应中起着至关重要的作用。白细胞滚动产生的拉伸力和血流产生的切应力是作用于 P 选择素/PSGL-1 键的两种类型的机械力。这些力不仅调节了这种键的离解动力学,还调节了白细胞的粘附动力学。然而,这两种力对键离解和相应的微观结构基础的各自贡献仍不清楚。为了模拟机械微环境,我们开发了两种分子动力学方法;即涉及受控速度梯度的切流场的方法和具有定义轨迹的轨迹拖动方法。通过每种方法或两种方法的组合,我们研究了 P-LE/SGP-3 结构的微观结构演变和离解动力学,这是 P 选择素/PSGL-1 复合物的最小功能单元。结果表明,切流和拉伸都在结构的崩塌中起着重要作用,并且在键离解之前,前者比后者更能破坏结构内的结构域。P-LE/SGP-3 结构的离解特征是表皮生长因子(EGF)结构域的分子内破坏,以及 P 选择素-凝集素/EGF 界面处氢键簇的断裂。因此,为了更好地了解力学如何影响 P 选择素/PSGL-1 复合物的离解动力学,我们在此提出了两种模拟其生理力学环境的方法。

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