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吡哆醇4-氧化酶的结晶及初步X射线分析,吡哆醇降解途径I中的首个酶

Crystallization and preliminary X-ray analysis of pyridoxine 4-oxidase, the first enzyme in pyridoxine degradation pathway I.

作者信息

Mugo Andrew Njagi, Kobayashi Jun, Mikami Bunzo, Ohnishi Kouhei, Yagi Toshiharu

机构信息

Faculty of Agriculture and Agricultural Science Program, Graduate School of Integral Arts and Science, Kochi University, Nankoku, Kochi 783-8502, Japan.

出版信息

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2012 Jan 1;68(Pt 1):66-8. doi: 10.1107/S1744309111048688. Epub 2011 Dec 24.

Abstract

Vitamin B(6)-degradation pathway I has recently been identified in Mesorhizobium loti MAFF303099. Pyridoxine 4-oxidase, an FAD-dependent enzyme, is the first enzyme in this pathway and catalyzes the irreversible oxidation of pyridoxine to pyridoxal. The enzyme was overexpressed in Escherichia coli with a His(6) tag and purified. The recombinant enzyme was crystallized at 277 K by the sitting-drop vapour-diffusion method using PEG 4000 as the precipitant. The crystal, which belonged to space group P2(1)2(1)2(1) with unit-cell parameters a = 62.38, b = 79.44, c = 136.43 Å, diffracted to 2.2 Å resolution. The calculated V(M) value (3.19 Å(3) Da(-1)) suggested that the asymmetric unit contained one molecule.

摘要

维生素B6降解途径I最近在百脉根中生根瘤菌MAFF303099中被发现。吡哆醇4-氧化酶是一种依赖黄素腺嘌呤二核苷酸的酶,是该途径中的第一种酶,催化吡哆醇不可逆地氧化为吡哆醛。该酶在带有His(6)标签的大肠杆菌中过表达并纯化。使用聚乙二醇4000作为沉淀剂,通过坐滴气相扩散法在277 K下使重组酶结晶。该晶体属于空间群P2(1)2(1)2(1),晶胞参数a = 62.38、b = 79.44、c = 136.43 Å,衍射分辨率达到2.2 Å。计算得到的V(M)值(3.19 Å(3) Da(-1))表明不对称单元包含一个分子。

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