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通过环介导等温扩增技术快速检测I群禽腺病毒

Rapid detection of group I avian adenoviruses by a loop-mediated isothermal amplification.

作者信息

Xie Zhixun, Tang Yi, Fan Qing, Liu Jiabo, Pang Yaoshan, Deng Xianwen, Xie Zhiqin, Peng Yi, Xie Liji, Khan Mazhar I

机构信息

Department of Biotechnology, Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China.

出版信息

Avian Dis. 2011 Dec;55(4):575-9. doi: 10.1637/9719-031611-Reg.1.

Abstract

A loop-mediated isothermal amplification (LAMP) assay was optimized for the rapid detection of Group I avian adenoviruses. A set of six primers was designed from the DNA sequences of hexon genes from Group I avian adenovirus. The assay was performed in a water bath for 60 min at 63 C, and the amplification result was visualized by adding a fluorescence dye reagent or by inspecting the white sediment. The results showed that the LAMP assay could detect all 12 serotypes of Group I avian adenovirus and nine Guangxi Group I avian adenovirus isolates. This avian adenovirus Group I-specific LAMP assay could detect 238 copies of avian adenovirus. No cross-reactions were detected using the LAMP assay with avian adenoviruses type II and III or with other avian viruses. The ability of LAMP to detect Group I avian adenovirus isolates was further evaluated with 184 cloacal swab samples from poultry. In total, 72 out of 184 cloacal swab samples from poultry were identified as positive by LAMP, whereas 45 out of 184 were identified as positive by conventional PCR test. The Group I avian adenovirus specific LAMP results were further confirmed by real-time PCR. This specific LAMP method holds promise as a rapid and specific diagnostic assay for detection of samples from birds suspected of adenovirus infection.

摘要

一种环介导等温扩增(LAMP)检测方法被优化用于I群禽腺病毒的快速检测。从I群禽腺病毒六邻体基因的DNA序列设计了一组六条引物。该检测在63℃水浴中进行60分钟,通过添加荧光染料试剂或检查白色沉淀来观察扩增结果。结果表明,LAMP检测方法能够检测I群禽腺病毒的所有12个血清型以及9株广西I群禽腺病毒分离株。这种I群禽腺病毒特异性LAMP检测方法能够检测到238个禽腺病毒拷贝。使用LAMP检测方法对II型和III型禽腺病毒或其他禽病毒未检测到交叉反应。用来自家禽的184份泄殖腔拭子样本进一步评估LAMP检测I群禽腺病毒分离株的能力。总共,184份家禽泄殖腔拭子样本中有72份经LAMP鉴定为阳性,而184份中有45份经传统PCR检测鉴定为阳性。I群禽腺病毒特异性LAMP结果通过实时PCR进一步得到证实。这种特异性LAMP方法有望成为一种快速、特异的诊断检测方法,用于检测疑似腺病毒感染鸟类的样本。

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