第一组内含子核酶
Group I intron ribozymes.
作者信息
Nielsen Henrik
机构信息
Department of Cellular and Molecular Medicine, The Panum Institute, University of Copenhagen, Copenhagen, Denmark.
出版信息
Methods Mol Biol. 2012;848:73-89. doi: 10.1007/978-1-61779-545-9_6.
Group I intron ribozymes constitute one of the main classes of ribozymes and have been a particularly important model in the discovery of key concepts in RNA biology as well as in the development of new methods. Compared to other ribozyme classes, group I intron ribozymes display considerable variation both in their structure and the reactions they catalyze. The best described pathway is the splicing pathway that results in a spliced out intron and ligated exons. This is paralleled by the circularization pathway that leads to full-length circular intron and un-ligated exons. In addition, the intronic products of these pathways have the potential to integrate into targets and to form various types of circular RNA molecules. Thus, group I intron ribozymes and associated elements found within group I introns is a rich source of biological phenomena. This chapter provides a strategy and protocols for initial characterization of new group I intron ribozymes.
I 组内含子核酶是核酶的主要类别之一,在RNA生物学关键概念的发现以及新方法的开发中一直是特别重要的模型。与其他核酶类别相比,I组内含子核酶在其结构和催化的反应方面都表现出相当大的差异。描述得最清楚的途径是剪接途径,其结果是切除内含子并连接外显子。与之平行的是环化途径,该途径导致全长环状内含子和未连接的外显子。此外,这些途径的内含子产物有可能整合到靶标中并形成各种类型的环状RNA分子。因此,I组内含子核酶以及I组内含子中发现的相关元件是丰富的生物学现象来源。本章提供了对新的I组内含子核酶进行初步表征的策略和方案。