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细胞器成熟过程中货物选择的 rab 募集的假设模型。

A hypothetical model of cargo-selective rab recruitment during organelle maturation.

机构信息

Institute of Biochemistry, Charité-Universitätsmedizin Berlin, Berlin, Germany.

出版信息

Cell Biochem Biophys. 2012 May;63(1):59-71. doi: 10.1007/s12013-012-9341-6.

Abstract

Rabs constitute a group of small GTPases that confer directionality to intracellular vesicle transport by promoting on the membrane of transport vesicles in the formation of specific protein complexes allowing for efficient fusion with a selected set of target organelles. The molecular mechanism controlling recruitment of the correct Rab at the right time is not fully understood. We propose a model according to which the residence time of a given Rab on the membrane of an organelle is determined by its transient trapping into a Rab effector complex (REC) composed of cargo receptor, SNAREs and further effectors. The stability of REC is controlled by the conformational state of the receptor which may change due to binding and release of cargo or changes in the luminal ion milieu. We use a conceptual mathematical model to calculate temporal changes in the Rab decoration of an organelle brought about by exchange with a cytosolic pool of Rabs or alternatively by budding and uptake of Rab-carrying vesicles. Considering the time-dependent drop in pH as one crucial factor for the conformational change of endocytic cargo receptors, our model provides a good quantitative description of the switch from Rab5 to Rab7 during the early-to-late endosome transition and correctly explains the arrest of this transition at insufficient luminal acidification. Model simulations suggest that a switch from one Rab to another may be continuous or abrupt. We discuss mechanisms, e.g. specific signalling pathways, which may restore an arrested organelle maturation.

摘要

Rabs 构成了一组小分子 GTPases,通过促进特定蛋白质复合物在运输小泡膜上的形成,为细胞内囊泡运输赋予方向性,从而促进与一组选定的靶细胞器的有效融合。控制正确的 Rab 在正确时间募集的分子机制尚未完全了解。我们提出了一个模型,根据该模型,给定 Rab 在细胞器膜上的停留时间由其瞬时捕获到由货物受体、SNARE 蛋白和其他效应物组成的 Rab 效应物复合物 (REC) 决定。REC 的稳定性由受体的构象状态控制,受体的构象状态可能由于货物的结合和释放或腔内部离子环境的变化而改变。我们使用概念数学模型来计算由于与细胞质中 Rab 池的交换或通过携带 Rab 的小泡的出芽和摄取而引起的细胞器中 Rab 装饰的时间变化。考虑到作为内吞货物受体构象变化的关键因素之一的 pH 值随时间的下降,我们的模型很好地描述了在早期到晚期内体过渡期间从 Rab5 到 Rab7 的转换,并正确解释了腔内酸化不足导致这种转换的停滞。模型模拟表明,从一个 Rab 到另一个 Rab 的转换可能是连续的或不连续的。我们讨论了可能恢复被阻断的细胞器成熟的机制,例如特定的信号通路。

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