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熊果酸噬几丁质菌,新属新种,一种从土壤中分离到的几丁质降解细菌。

Amantichitinum ursilacus gen. nov., sp. nov., a chitin-degrading bacterium isolated from soil.

机构信息

Institute for Interfacial Engineering, University of Stuttgart, Nobelstraße 12, 70569 Stuttgart, Germany.

Fraunhofer Institute for Interfacial Engineering and Biotechnology, Nobelstraße 12, 70569 Stuttgart, Germany.

出版信息

Int J Syst Evol Microbiol. 2013 Jan;63(Pt 1):98-103. doi: 10.1099/ijs.0.034447-0. Epub 2012 Feb 17.

Abstract

A bacterial strain named IGB-41(T) was isolated from a soil sample from an ant hill near Stuttgart, Germany. The strain was Gram-negative, rod-shaped, motile and facultatively anaerobic. Phylogenetic analysis based on 16S rRNA grouped the strain IGB-41(T) within the class Betaproteobacteria into the family Neisseriaceae together with Silvimonas amylolytica NBRC 103189(T), Silvimonas iriomotensis NBRC 103188(T) and Silvimonas terrae KM-45(T) as the closest relatives with sequence similarities of 96.7, 96.6 and 96.1 %, respectively. The G+C content of the genomic DNA was determined to be 61.5 mol% and quinone analysis revealed Q-8 as the only detectable quinone. Major cellular fatty acids were identified as C(16 : 0), summed feature 3 (iso-C(15 : 0) 2-OH and/or C(16 : 1)ω7c) and C(18 : 1)ω7c . Strain IGB-41(T) was unique in harbouring phosphoaminolipids, aminolipids and glycoaminolipids when compared with Silvimonas amylolytica NBRC 103189(T) in polar lipid analysis. On the basis of the physiological, phenotypic and genotypic characteristics of strain IGB-41(T), we suggest that the novel strain should be assigned to a new genus Amantichitinum and novel species Amantichitinum ursilacus. The type species of the genus Amantichitinum is Amantichitinum ursilacus and the type strain is IGB-41(T) (=DSM 23761(T) =CIP 110167(T)).

摘要

一株名为 IGB-41(T)的细菌菌株从德国斯图加特附近的蚁丘土壤样本中分离得到。该菌株革兰氏阴性,杆状,可运动,兼性厌氧。基于 16S rRNA 的系统发育分析将菌株 IGB-41(T)归入β变形菌纲的 Neisseriaceae 科,与 Silvimonas amylolytica NBRC 103189(T)、Silvimonas iriomotensis NBRC 103188(T)和 Silvimonas terrae KM-45(T)亲缘关系最近,序列相似度分别为 96.7%、96.6%和 96.1%。基因组 DNA 的 G+C 含量测定为 61.5 mol%,醌分析显示仅存在 Q-8 作为唯一可检测的醌。主要细胞脂肪酸鉴定为 C(16:0)、总和特征 3(异-C(15:0)2-OH 和/或 C(16:1)ω7c)和 C(18:1)ω7c。与 Silvimonas amylolytica NBRC 103189(T)相比,菌株 IGB-41(T)在极性脂分析中唯一含有磷酸氨基脂、氨基脂和糖氨基脂。根据菌株 IGB-41(T)的生理、表型和基因型特征,我们建议将该新菌株分配到一个新属 Amantichitinum 中,并将新种命名为 Amantichitinum ursilacus。属名的模式种为 Amantichitinum ursilacus,模式菌株为 IGB-41(T)=DSM 23761(T)=CIP 110167(T)。

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