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土壤西尔维单胞菌,新属,新种,一种属于“β-变形菌纲”的新型几丁质降解兼性厌氧菌。

Silvimonas terrae gen. nov., sp. nov., a novel chitin-degrading facultative anaerobe belonging to the 'Betaproteobacteria'.

作者信息

Yang Hee-Chan, Im Wan-Taek, An Dong-Shan, Park Woo-Shin, Kim In S, Lee Sung-Taik

机构信息

Department of Biological Sciences, Korea Advanced Institute of Science and Technology, 373-1, Guseong-dong, Yuseong-gu, Daejeon 305-701, South Korea.

Department of Environmental Science and Engineering, Gwangju Institute of Science and Technology, 1 Oryong-dong, Buk-gu, Gwangju 500-712, South Korea.

出版信息

Int J Syst Evol Microbiol. 2005 Nov;55(Pt 6):2329-2332. doi: 10.1099/ijs.0.63837-0.

Abstract

A taxonomic study was carried out on a bacterial strain, designated KM-45T, isolated from forest soil collected near Daejeon, South Korea. Comparative 16S rRNA gene sequence analysis indicated a clear affiliation of this bacterium to the 'Betaproteobacteria' and that it was related most closely to Chitinibacter tainanensis BCRC 17254T, Formivibrio citricus DSM 6150T and Iodobacter fluviatilis ATCC 33051T (92.4, 91.2 and 88.9 % 16S rRNA gene sequence similarity, respectively). Cells were Gram-negative, facultatively anaerobic, motile and rod-shaped. The strain grew well on R2A medium and utilized a broad spectrum of carbon sources. The G+C content of the genomic DNA was 58 mol% and the predominant ubiquinone was Q-8. Major fatty acids were C(16 : 0), C(16 : 1)omega7c/iso-C(15 : 0) 2-OH, C(18 : 1)omega7c/omega9t/omega12t and C(17 : 0) cyclo. On the basis of the evidence presented, it is proposed that strain KM-45T should be placed in a novel genus and species, for which the name Silvimonas terrae gen. nov., sp. nov. is proposed. The type strain is KM-45T (=KCTC 12358T=NBRC 100961T).

摘要

对从韩国大田附近采集的森林土壤中分离出的一株编号为KM-45T的细菌菌株进行了分类学研究。16S rRNA基因序列比较分析表明,该细菌明确属于“β-变形菌纲”,且与台南嗜几丁质菌BCRC 17254T、柠檬酸形菌DSM 6150T和河生碘杆菌ATCC 33051T关系最为密切(16S rRNA基因序列相似性分别为92.4%、91.2%和88.9%)。细胞为革兰氏阴性、兼性厌氧、具运动性且呈杆状。该菌株在R2A培养基上生长良好,利用多种碳源。基因组DNA的G+C含量为58 mol%,主要泛醌为Q-8。主要脂肪酸为C(16 : 0)、C(16 : 1)ω7c/异-C(15 : 0) 2-OH、C(18 : 1)ω7c/ω9t/ω12t和C(17 : 0)环丙烷脂肪酸。根据所提供的证据,建议将菌株KM-45T归入一个新的属和种,命名为土壤森林单胞菌属(Silvimonas terrae),新属,新种。模式菌株为KM-45T(=KCTC 12358T=NBRC 100961T)。

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