Suppr超能文献

通讯:变分多体展开:在基于片段的显式极化方法中考虑交换排斥、电荷离域和色散。

Communication: variational many-body expansion: accounting for exchange repulsion, charge delocalization, and dispersion in the fragment-based explicit polarization method.

机构信息

Department of Chemistry and Supercomputing Institute, University of Minnesota, Minneapolis, Minnesota 55455, USA.

出版信息

J Chem Phys. 2012 Feb 21;136(7):071101. doi: 10.1063/1.3688232.

Abstract

A fragment-based variational many-body (VMB) expansion method is described to directly account for exchange repulsion, charge delocalization (charge transfer) and dispersion interactions in the explicit polarization (X-Pol) method. The present VMB/X-Pol approach differs from other fragment molecular orbital (FMO) techniques in two major aspects. First, the wave function for the monomeric system is variationally optimized using standard X-Pol method, as opposed to the iterative update procedure adopted in FMO. Second, the mutual polarizations in the dimeric terms are also variationally determined, whereas single-point energy calculations of the individual dimers embedded in a static monomer field are used in FMO. The second-order (two-body) VMB (VMB2) expansion method is illustrated on a series of water hexamer complexes and one decamer cluster, making use of Hartree-Fock theory, MP2, and the PBE1 and M06 density functionals to represent the monomer and dimer fragments. The computed binding energies are within 2 kcal/mol of the corresponding results from fully delocalized calculations. Energy decomposition analyses reveal specific dimeric contributions to exchange repulsion, charge delocalization, and dispersion. Since the wave functions for one-body and all two-body terms are variationally optimized in VMB2 and X-Pol, it is straightforward to obtain analytic gradient without the additional coupled-perturbed Hartree-Fock step. Thus, the method can be useful for molecular dynamics simulations.

摘要

一种基于片段的变分多体 (VMB) 扩展方法被描述为直接在显式极化 (X-Pol) 方法中考虑交换排斥、电荷离域(电荷转移)和色散相互作用。目前的 VMB/X-Pol 方法与其他片段分子轨道 (FMO) 技术在两个主要方面不同。首先,使用标准的 X-Pol 方法对单体系统的波函数进行变分优化,而不是 FMO 中采用的迭代更新过程。其次,二聚体项中的相互极化也是通过变分确定的,而 FMO 中则使用嵌入在静态单体场中的单个二聚体的单点能计算。二阶(双体)VMB(VMB2)扩展方法在一系列水六聚体复合物和一个十聚体簇上进行了说明,使用 Hartree-Fock 理论、MP2 以及 PBE1 和 M06 密度泛函来表示单体和二聚体片段。计算得到的结合能与完全离域计算的相应结果相差 2 kcal/mol 以内。能量分解分析揭示了交换排斥、电荷离域和色散的特定二聚体贡献。由于 VMB2 和 X-Pol 中对单体重和所有双体重项的波函数进行了变分优化,因此可以直接获得解析梯度,而无需额外的耦合微扰 Hartree-Fock 步骤。因此,该方法可用于分子动力学模拟。

相似文献

3
Generalized X-Pol Theory and Charge Delocalization States.广义X偏振理论与电荷离域态
J Chem Theory Comput. 2010 Aug 10;6(8):2402-10. doi: 10.1021/ct100292g.
9
Towards a force field based on density fitting.迈向基于密度拟合的力场。
J Chem Phys. 2006 Mar 14;124(10):104101. doi: 10.1063/1.2173256.
10
On the Interfragment Exchange in the X-Pol Method.关于X-Pol方法中的片段间交换
J Chem Theory Comput. 2010;6(8):2469-2476. doi: 10.1021/ct100268p.

引用本文的文献

3
Quantum mechanical force fields for condensed phase molecular simulations.用于凝聚相分子模拟的量子力学力场。
J Phys Condens Matter. 2017 Sep 27;29(38):383002. doi: 10.1088/1361-648X/aa7c5c. Epub 2017 Aug 17.

本文引用的文献

2
Generalized X-Pol Theory and Charge Delocalization States.广义X偏振理论与电荷离域态
J Chem Theory Comput. 2010 Aug 10;6(8):2402-10. doi: 10.1021/ct100292g.

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验